sitkSTAPLEImageFilter.h

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/*=========================================================================
*
*  Copyright Insight Software Consortium
*
*  Licensed under the Apache License, Version 2.0 (the "License");
*  you may not use this file except in compliance with the License.
*  You may obtain a copy of the License at
*
*         http://www.apache.org/licenses/LICENSE-2.0.txt
*
*  Unless required by applicable law or agreed to in writing, software
*  distributed under the License is distributed on an "AS IS" BASIS,
*  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
*  See the License for the specific language governing permissions and
*  limitations under the License.
*
*=========================================================================*/
#ifndef sitkSTAPLEImageFilter_h
#define sitkSTAPLEImageFilter_h

/*
 * WARNING: DO NOT EDIT THIS FILE!
 * THIS FILE IS AUTOMATICALLY GENERATED BY THE SIMPLEITK BUILD PROCESS.
 * Please look at sitkMultiInputImageFilterTemplate.h.in to make changes.
 */

#include <memory>

#include "sitkBasicFilters.h"
#include "sitkImageFilter.h"

namespace itk {
  namespace simple {

    class SITKBasicFilters_EXPORT STAPLEImageFilter
      : public ImageFilter<3>
    {
    public:
      typedef STAPLEImageFilter Self;

      virtual ~STAPLEImageFilter();


      STAPLEImageFilter();

      typedef IntegerPixelIDTypeList  PixelIDTypeList;




      SITK_RETURN_SELF_TYPE_HEADER SetConfidenceWeight ( double ConfidenceWeight ) { this->m_ConfidenceWeight = ConfidenceWeight; return *this; }

        double GetConfidenceWeight() const { return this->m_ConfidenceWeight; }

      SITK_RETURN_SELF_TYPE_HEADER SetForegroundValue ( double ForegroundValue ) { this->m_ForegroundValue = ForegroundValue; return *this; }

        double GetForegroundValue() const { return this->m_ForegroundValue; }

      SITK_RETURN_SELF_TYPE_HEADER SetMaximumIterations ( unsigned int MaximumIterations ) { this->m_MaximumIterations = MaximumIterations; return *this; }

        unsigned int GetMaximumIterations() const { return this->m_MaximumIterations; }
     uint32_t GetElapsedIterations() const { return this->m_ElapsedIterations; };

     std::vector<double> GetSensitivity() const { return this->m_Sensitivity; };

     std::vector<double> GetSpecificity () const { return this->m_Specificity ; };

      std::string GetName() const { return std::string ("STAPLEImageFilter"); }

      std::string ToString() const;

      Image Execute ( const std::vector<Image> &images);
      Image Execute ( const Image& image1 );
      Image Execute ( const Image& image1, const Image& image2 );
      Image Execute ( const Image& image1, const Image& image2, const Image& image3 );
      Image Execute ( const Image& image1, const Image& image2, const Image& image3, const Image& image4 );
      Image Execute ( const Image& image1, const Image& image2, const Image& image3, const Image& image4, const Image& image5 );



      Image Execute ( const std::vector<Image> &images, double confidenceWeight, double foregroundValue, unsigned int maximumIterations );
      Image Execute ( const Image& image1, double confidenceWeight, double foregroundValue, unsigned int maximumIterations );
      Image Execute ( const Image& image1, const Image& image2, double confidenceWeight, double foregroundValue, unsigned int maximumIterations );
      Image Execute ( const Image& image1, const Image& image2, const Image& image3, double confidenceWeight, double foregroundValue, unsigned int maximumIterations );
      Image Execute ( const Image& image1, const Image& image2, const Image& image3, const Image& image4, double confidenceWeight, double foregroundValue, unsigned int maximumIterations );
      Image Execute ( const Image& image1, const Image& image2, const Image& image3, const Image& image4, const Image& image5, double confidenceWeight, double foregroundValue, unsigned int maximumIterations );




    private:

      typedef Image (Self::*MemberFunctionType)( const std::vector<Image> & );
      template <class TImageType> Image ExecuteInternal ( const std::vector<Image> &images );



      friend struct detail::MemberFunctionAddressor<MemberFunctionType>;

      nsstd::auto_ptr<detail::MemberFunctionFactory<MemberFunctionType> > m_MemberFactory;


      double  m_ConfidenceWeight;
      double  m_ForegroundValue;
      unsigned int  m_MaximumIterations;

      uint32_t m_ElapsedIterations;

      std::vector<double> m_Sensitivity;

      std::vector<double> m_Specificity ;

    };


     SITKBasicFilters_EXPORT Image STAPLE ( const std::vector<Image> &images , double confidenceWeight = 1.0, double foregroundValue = 1.0, unsigned int maximumIterations = std::numeric_limits<unsigned int>::max() );

     SITKBasicFilters_EXPORT Image STAPLE ( const Image& image1, double confidenceWeight = 1.0, double foregroundValue = 1.0, unsigned int maximumIterations = std::numeric_limits<unsigned int>::max() );
     SITKBasicFilters_EXPORT Image STAPLE ( const Image& image1, const Image& image2, double confidenceWeight = 1.0, double foregroundValue = 1.0, unsigned int maximumIterations = std::numeric_limits<unsigned int>::max() );
     SITKBasicFilters_EXPORT Image STAPLE ( const Image& image1, const Image& image2, const Image& image3, double confidenceWeight = 1.0, double foregroundValue = 1.0, unsigned int maximumIterations = std::numeric_limits<unsigned int>::max() );
     SITKBasicFilters_EXPORT Image STAPLE ( const Image& image1, const Image& image2, const Image& image3, const Image& image4, double confidenceWeight = 1.0, double foregroundValue = 1.0, unsigned int maximumIterations = std::numeric_limits<unsigned int>::max() );
     SITKBasicFilters_EXPORT Image STAPLE ( const Image& image1, const Image& image2, const Image& image3, const Image& image4, const Image& image5, double confidenceWeight = 1.0, double foregroundValue = 1.0, unsigned int maximumIterations = std::numeric_limits<unsigned int>::max() );

}
}
#endif