tfx.cxx

// This one header will include all SimpleITK filters and external
// objects.
#include <SimpleITK.h>
#include <iostream>
#include <stdlib.h>
 
namespace sitk = itk::simple;
 
int main ( int argc, char* argv[] ) {
 
  if ( argc < 3 ) {
    std::cerr << "Usage: " << argv[0] << " <inputImage> <parameterFile> <outputImage>\n";
    return 1;
  }
 
  // Instantiate transformix
  sitk::TransformixImageFilter transformixImageFilter;
  transformixImageFilter.LogToConsoleOn();
 
  // Read input
  sitk::ImageFileReader reader;
  reader.SetFileName( std::string( argv[1] ) );
  transformixImageFilter.SetMovingImage( reader.Execute() );
  transformixImageFilter.SetTransformParameterMap( sitk::ReadParameterFile( argv[2] ) );
 
  // Run warp
  transformixImageFilter.Execute();
 
  // Write result image
  sitk::ImageFileWriter writer;
  writer.SetFileName( std::string( argv[3] ) );
  writer.Execute( transformixImageFilter.GetResultImage() );
 
  return 0;
}