sitkScalarChanAndVeseDenseLevelSetImageFilter.h

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*
*  Copyright NumFOCUS
*
*  Licensed under the Apache License, Version 2.0 (the "License");
*  you may not use this file except in compliance with the License.
*  You may obtain a copy of the License at
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*         http://www.apache.org/licenses/LICENSE-2.0.txt
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*  distributed under the License is distributed on an "AS IS" BASIS,
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*  See the License for the specific language governing permissions and
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#ifndef sitkScalarChanAndVeseDenseLevelSetImageFilter_h
#define sitkScalarChanAndVeseDenseLevelSetImageFilter_h
 
/*
 * WARNING: DO NOT EDIT THIS FILE!
 * THIS FILE IS AUTOMATICALLY GENERATED BY THE SIMPLEITK BUILD PROCESS.
 * Please look at sitkImageFilterTemplate.h.in to make changes.
 */
 
#include <memory>
 
#include "sitkBasicFilters.h"
#include "sitkImageFilter.h"
 
namespace itk {
  namespace simple {
 
    class SITKBasicFilters_EXPORT ScalarChanAndVeseDenseLevelSetImageFilter : public ImageFilter {
    public:
      using Self = ScalarChanAndVeseDenseLevelSetImageFilter;
 
      virtual ~ScalarChanAndVeseDenseLevelSetImageFilter();
 
      ScalarChanAndVeseDenseLevelSetImageFilter();
 
      using PixelIDTypeList = RealPixelIDTypeList;
\
 
      SITK_RETURN_SELF_TYPE_HEADER SetMaximumRMSError ( double MaximumRMSError ) { this->m_MaximumRMSError = MaximumRMSError; return *this; }
 
      double GetMaximumRMSError() const { return this->m_MaximumRMSError; }\
 
      SITK_RETURN_SELF_TYPE_HEADER SetNumberOfIterations ( uint32_t NumberOfIterations ) { this->m_NumberOfIterations = NumberOfIterations; return *this; }
 
      uint32_t GetNumberOfIterations() const { return this->m_NumberOfIterations; }\
 
      SITK_RETURN_SELF_TYPE_HEADER SetLambda1 ( double Lambda1 ) { this->m_Lambda1 = Lambda1; return *this; }
 
      double GetLambda1() const { return this->m_Lambda1; }\
 
      SITK_RETURN_SELF_TYPE_HEADER SetLambda2 ( double Lambda2 ) { this->m_Lambda2 = Lambda2; return *this; }
 
      double GetLambda2() const { return this->m_Lambda2; }\
 
      SITK_RETURN_SELF_TYPE_HEADER SetEpsilon ( double Epsilon ) { this->m_Epsilon = Epsilon; return *this; }
 
      double GetEpsilon() const { return this->m_Epsilon; }\
 
      SITK_RETURN_SELF_TYPE_HEADER SetCurvatureWeight ( double CurvatureWeight ) { this->m_CurvatureWeight = CurvatureWeight; return *this; }
 
      double GetCurvatureWeight() const { return this->m_CurvatureWeight; }\
 
      SITK_RETURN_SELF_TYPE_HEADER SetAreaWeight ( double AreaWeight ) { this->m_AreaWeight = AreaWeight; return *this; }
 
      double GetAreaWeight() const { return this->m_AreaWeight; }\
 
      SITK_RETURN_SELF_TYPE_HEADER SetReinitializationSmoothingWeight ( double ReinitializationSmoothingWeight ) { this->m_ReinitializationSmoothingWeight = ReinitializationSmoothingWeight; return *this; }
 
      double GetReinitializationSmoothingWeight() const { return this->m_ReinitializationSmoothingWeight; }\
 
      SITK_RETURN_SELF_TYPE_HEADER SetVolume ( double Volume ) { this->m_Volume = Volume; return *this; }
 
      double GetVolume() const { return this->m_Volume; }\
 
      SITK_RETURN_SELF_TYPE_HEADER SetVolumeMatchingWeight ( double VolumeMatchingWeight ) { this->m_VolumeMatchingWeight = VolumeMatchingWeight; return *this; }
 
      double GetVolumeMatchingWeight() const { return this->m_VolumeMatchingWeight; }
 
      typedef enum {AtanRegularizedHeaviside,SinRegularizedHeaviside,Heaviside} HeavisideStepFunctionType;\
 
      SITK_RETURN_SELF_TYPE_HEADER SetHeavisideStepFunction ( HeavisideStepFunctionType HeavisideStepFunction ) { this->m_HeavisideStepFunction = HeavisideStepFunction; return *this; }
 
      HeavisideStepFunctionType GetHeavisideStepFunction() const { return this->m_HeavisideStepFunction; }\
 
      SITK_RETURN_SELF_TYPE_HEADER SetUseImageSpacing ( bool UseImageSpacing ) { this->m_UseImageSpacing = UseImageSpacing; return *this; }
 
      SITK_RETURN_SELF_TYPE_HEADER UseImageSpacingOn() { return this->SetUseImageSpacing(true); }
      SITK_RETURN_SELF_TYPE_HEADER UseImageSpacingOff() { return this->SetUseImageSpacing(false); }
 
      bool GetUseImageSpacing() const { return this->m_UseImageSpacing; }
     uint32_t GetElapsedIterations() const { return this->m_ElapsedIterations; };
 
     double GetRMSChange() const { return this->m_RMSChange; };
 
 
      std::string GetName() const { return std::string ("ScalarChanAndVeseDenseLevelSetImageFilter"); }
 
      std::string ToString() const;
 
 
      Image Execute ( const Image & initialImage, const Image & featureImage );
 
    private:
 
      using MemberFunctionType = Image (Self::*)( const Image * initialImage, const Image * featureImage );
      template <class TImageType> Image ExecuteInternal ( const Image * initialImage, const Image * featureImage );
 
 
      friend struct detail::MemberFunctionAddressor<MemberFunctionType>;
 
      std::unique_ptr<detail::MemberFunctionFactory<MemberFunctionType> > m_MemberFactory;
 
 
      /* Value of RMS change below which the filter should stop. This is a convergence criterion. */
      double  m_MaximumRMSError{0.02};
 
      /* Number of iterations to run */
      uint32_t  m_NumberOfIterations{1000u};
 
      /* Lambda1. Internal intensity difference weight */
      double  m_Lambda1{1.0};
 
      /* Lambda2. External intensity difference weight */
      double  m_Lambda2{1.0};
 
      /* Width of regularization of Heaviside function. */
      double  m_Epsilon{1.0};
 
      /* Gamma. Scales all curvature weight values  */
      double  m_CurvatureWeight{1.0};
 
      /* Nu. Area regularization values */
      double  m_AreaWeight{0.0};
 
      /* Weight of the laplacian smoothing term */
      double  m_ReinitializationSmoothingWeight{0.0};
 
      /*  Pixel Volume = Number of pixels inside the level-set */
      double  m_Volume{0.0};
 
      /* Volume matching weight. */
      double  m_VolumeMatchingWeight{0.0};
 
      /* Step functions */
      HeavisideStepFunctionType  m_HeavisideStepFunction{itk::simple::ScalarChanAndVeseDenseLevelSetImageFilter::AtanRegularizedHeaviside};
 
      bool  m_UseImageSpacing{true};
 
 
      uint32_t m_ElapsedIterations{0};
 
      double m_RMSChange{0.0};
 
 
    };
 
     SITKBasicFilters_EXPORT Image ScalarChanAndVeseDenseLevelSet ( const Image & initialImage, const Image & featureImage, double maximumRMSError = 0.02, uint32_t numberOfIterations = 1000u, double lambda1 = 1.0, double lambda2 = 1.0, double epsilon = 1.0, double curvatureWeight = 1.0, double areaWeight = 0.0, double reinitializationSmoothingWeight = 0.0, double volume = 0.0, double volumeMatchingWeight = 0.0, ScalarChanAndVeseDenseLevelSetImageFilter::HeavisideStepFunctionType heavisideStepFunction = itk::simple::ScalarChanAndVeseDenseLevelSetImageFilter::AtanRegularizedHeaviside, bool useImageSpacing = true );
 
  }
}
#endif