SimpleITK  1.0.1
sitkSTAPLEImageFilter.h
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18 #ifndef sitkSTAPLEImageFilter_h
19 #define sitkSTAPLEImageFilter_h
20 
21 /*
22  * WARNING: DO NOT EDIT THIS FILE!
23  * THIS FILE IS AUTOMATICALLY GENERATED BY THE SIMPLEITK BUILD PROCESS.
24  * Please look at sitkMultiInputImageFilterTemplate.h.in to make changes.
25  */
26 
27 #include <memory>
28 
29 #include "sitkBasicFilters.h"
30 #include "sitkImageFilter.h"
31 
32 namespace itk {
33  namespace simple {
34 
74  : public ImageFilter<3>
75  {
76  public:
78 
82 
85 
88 
89 
90 
91 
95  SITK_RETURN_SELF_TYPE_HEADER SetConfidenceWeight ( double ConfidenceWeight ) { this->m_ConfidenceWeight = ConfidenceWeight; return *this; }
96 
100  double GetConfidenceWeight() const { return this->m_ConfidenceWeight; }
101 
105  SITK_RETURN_SELF_TYPE_HEADER SetForegroundValue ( double ForegroundValue ) { this->m_ForegroundValue = ForegroundValue; return *this; }
106 
110  double GetForegroundValue() const { return this->m_ForegroundValue; }
111 
115  SITK_RETURN_SELF_TYPE_HEADER SetMaximumIterations ( unsigned int MaximumIterations ) { this->m_MaximumIterations = MaximumIterations; return *this; }
116 
120  unsigned int GetMaximumIterations() const { return this->m_MaximumIterations; }
127  uint32_t GetElapsedIterations() const { return this->m_ElapsedIterations; };
128 
135  std::vector<double> GetSensitivity() const { return this->m_Sensitivity; };
136 
143  std::vector<double> GetSpecificity () const { return this->m_Specificity ; };
144 
146  std::string GetName() const { return std::string ("STAPLEImageFilter"); }
147 
149  std::string ToString() const;
150 
152  Image Execute ( const std::vector<Image> &images);
153  Image Execute ( const Image& image1 );
154  Image Execute ( const Image& image1, const Image& image2 );
155  Image Execute ( const Image& image1, const Image& image2, const Image& image3 );
156  Image Execute ( const Image& image1, const Image& image2, const Image& image3, const Image& image4 );
157  Image Execute ( const Image& image1, const Image& image2, const Image& image3, const Image& image4, const Image& image5 );
158 
159 
160 
162  Image Execute ( const std::vector<Image> &images, double confidenceWeight, double foregroundValue, unsigned int maximumIterations );
163  Image Execute ( const Image& image1, double confidenceWeight, double foregroundValue, unsigned int maximumIterations );
164  Image Execute ( const Image& image1, const Image& image2, double confidenceWeight, double foregroundValue, unsigned int maximumIterations );
165  Image Execute ( const Image& image1, const Image& image2, const Image& image3, double confidenceWeight, double foregroundValue, unsigned int maximumIterations );
166  Image Execute ( const Image& image1, const Image& image2, const Image& image3, const Image& image4, double confidenceWeight, double foregroundValue, unsigned int maximumIterations );
167  Image Execute ( const Image& image1, const Image& image2, const Image& image3, const Image& image4, const Image& image5, double confidenceWeight, double foregroundValue, unsigned int maximumIterations );
168 
169 
170 
171 
172  private:
173 
176  typedef Image (Self::*MemberFunctionType)( const std::vector<Image> & );
177  template <class TImageType> Image ExecuteInternal ( const std::vector<Image> &images );
178 
179 
180 
181  friend struct detail::MemberFunctionAddressor<MemberFunctionType>;
182 
183  nsstd::auto_ptr<detail::MemberFunctionFactory<MemberFunctionType> > m_MemberFactory;
184 
185 
188  unsigned int m_MaximumIterations;
189 
191 
192  std::vector<double> m_Sensitivity;
193 
194  std::vector<double> m_Specificity ;
195 
196  };
197 
198 
208  SITKBasicFilters_EXPORT Image STAPLE ( const std::vector<Image> &images , double confidenceWeight = 1.0, double foregroundValue = 1.0, unsigned int maximumIterations = std::numeric_limits<unsigned int>::max() );
209 
210  SITKBasicFilters_EXPORT Image STAPLE ( const Image& image1, double confidenceWeight = 1.0, double foregroundValue = 1.0, unsigned int maximumIterations = std::numeric_limits<unsigned int>::max() );
211  SITKBasicFilters_EXPORT Image STAPLE ( const Image& image1, const Image& image2, double confidenceWeight = 1.0, double foregroundValue = 1.0, unsigned int maximumIterations = std::numeric_limits<unsigned int>::max() );
212  SITKBasicFilters_EXPORT Image STAPLE ( const Image& image1, const Image& image2, const Image& image3, double confidenceWeight = 1.0, double foregroundValue = 1.0, unsigned int maximumIterations = std::numeric_limits<unsigned int>::max() );
213  SITKBasicFilters_EXPORT Image STAPLE ( const Image& image1, const Image& image2, const Image& image3, const Image& image4, double confidenceWeight = 1.0, double foregroundValue = 1.0, unsigned int maximumIterations = std::numeric_limits<unsigned int>::max() );
214  SITKBasicFilters_EXPORT Image STAPLE ( const Image& image1, const Image& image2, const Image& image3, const Image& image4, const Image& image5, double confidenceWeight = 1.0, double foregroundValue = 1.0, unsigned int maximumIterations = std::numeric_limits<unsigned int>::max() );
215 
218 }
219 }
220 #endif
Self & SetForegroundValue(double ForegroundValue)
Self & SetMaximumIterations(unsigned int MaximumIterations)
typelist::MakeTypeList< BasicPixelID< int8_t >, BasicPixelID< uint8_t >, BasicPixelID< int16_t >, BasicPixelID< uint16_t >, BasicPixelID< int32_t >, BasicPixelID< uint32_t > >::Type IntegerPixelIDTypeList
#define SITKBasicFilters_EXPORT
unsigned int GetMaximumIterations() const
std::vector< double > GetSensitivity() const
Image STAPLE(const std::vector< Image > &images, double confidenceWeight=1.0, double foregroundValue=1.0, unsigned int maximumIterations=std::numeric_limits< unsigned int >::max())
The STAPLE filter implements the Simultaneous Truth and Performance Level Estimation algorithm for ge...
Self & SetConfidenceWeight(double ConfidenceWeight)
::uint32_t uint32_t
std::vector< double > GetSpecificity() const
After the filter is updated, this method returns the Specificity (true negative fraction, q) value for the i-th expert input volume.
The main Image class for SimpleITK.
Definition: sitkImage.h:54
The STAPLE filter implements the Simultaneous Truth and Performance Level Estimation algorithm for ge...
nsstd::auto_ptr< detail::MemberFunctionFactory< MemberFunctionType > > m_MemberFactory
The base interface for SimpleITK filters that take one input image.
IntegerPixelIDTypeList PixelIDTypeList