sitkMultiLabelSTAPLEImageFilter.h

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/*=========================================================================
*
*  Copyright NumFOCUS
*
*  Licensed under the Apache License, Version 2.0 (the "License");
*  you may not use this file except in compliance with the License.
*  You may obtain a copy of the License at
*
*         http://www.apache.org/licenses/LICENSE-2.0.txt
*
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*  distributed under the License is distributed on an "AS IS" BASIS,
*  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
*  See the License for the specific language governing permissions and
*  limitations under the License.
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*=========================================================================*/
#ifndef sitkMultiLabelSTAPLEImageFilter_h
#define sitkMultiLabelSTAPLEImageFilter_h
 
/*
 * WARNING: DO NOT EDIT THIS FILE!
 * THIS FILE IS AUTOMATICALLY GENERATED BY THE SIMPLEITK BUILD PROCESS.
 * Please look at sitkMultiInputImageFilterTemplate.h.jinja to make changes.
 */
 
#include <memory>
 
#include "sitkBasicFilters.h"
#include "sitkImageFilter.h"
#include "sitkProcessObjectDeleter.h"
 
namespace itk::simple {

class SITKBasicFilters_EXPORT MultiLabelSTAPLEImageFilter : public ImageFilter {
public:
  using Self = MultiLabelSTAPLEImageFilter;

  virtual ~MultiLabelSTAPLEImageFilter();

  MultiLabelSTAPLEImageFilter();

  using PixelIDTypeList = UnsignedIntegerPixelIDTypeList;
 
 
 
 

  void
  SetLabelForUndecidedPixels(uint64_t LabelForUndecidedPixels )
    { this->m_LabelForUndecidedPixels = LabelForUndecidedPixels; }

  uint64_t
  GetLabelForUndecidedPixels() const { return this->m_LabelForUndecidedPixels; }
 

  void
  SetTerminationUpdateThreshold(float TerminationUpdateThreshold )
    { this->m_TerminationUpdateThreshold = TerminationUpdateThreshold; }

  float
  GetTerminationUpdateThreshold() const { return this->m_TerminationUpdateThreshold; }
 

  void
  SetMaximumNumberOfIterations(unsigned int MaximumNumberOfIterations )
    { this->m_MaximumNumberOfIterations = MaximumNumberOfIterations; }

  unsigned int
  GetMaximumNumberOfIterations() const { return this->m_MaximumNumberOfIterations; }
 

  void
  SetPriorProbabilities(std::vector<double> PriorProbabilities )
    { this->m_PriorProbabilities = PriorProbabilities; }

  std::vector<double>
  GetPriorProbabilities() const { return this->m_PriorProbabilities; }
 

  std::vector<double> GetConfusionMatrix(unsigned int input)const { return this->m_pfGetConfusionMatrix(input); }

  std::string GetName() const { return std::string("MultiLabelSTAPLEImageFilter"); }

  std::string ToString() const;

   Image Execute(const std::vector<Image> &images);
 
   Image Execute(const Image& image1);
 
   Image Execute(const Image& image1, const Image& image2);
 
   Image Execute(const Image& image1, const Image& image2, const Image& image3);
 
   Image Execute(const Image& image1, const Image& image2, const Image& image3, const Image& image4);
 
   Image Execute(const Image& image1, const Image& image2, const Image& image3, const Image& image4, const Image& image5);
 
 
 
 
private:

    using MemberFunctionType = Image (Self::*)(const std::vector<Image> &);
    template <class TImageType> Image ExecuteInternal(const std::vector<Image> &images);
 
    
    
 
    friend struct detail::MemberFunctionAddressor<MemberFunctionType>;
    static const detail::MemberFunctionFactory<MemberFunctionType> &GetMemberFunctionFactory();
 
 
    uint64_t m_LabelForUndecidedPixels{ std::numeric_limits<uint64_t>::max() };
 
    float m_TerminationUpdateThreshold{ 1e-5f };
 
    unsigned int m_MaximumNumberOfIterations{ std::numeric_limits<unsigned int>::max() };
 
    std::vector<double> m_PriorProbabilities{ std::vector<double>() };
 
 
 
    std::function<std::vector<double>(unsigned int)> m_pfGetConfusionMatrix;
 
 
    // Holder of process object for active measurements
    std::unique_ptr<itk::ProcessObject, ProcessObjectDeleter> m_Filter{nullptr};
 
 
 
};
 

SITKBasicFilters_EXPORT Image MultiLabelSTAPLE(const std::vector<Image> &images, uint64_t labelForUndecidedPixels = std::numeric_limits<uint64_t>::max(), float terminationUpdateThreshold = 1e-5f, unsigned int maximumNumberOfIterations = std::numeric_limits<unsigned int>::max(), std::vector<double> priorProbabilities = std::vector<double>());
 
SITKBasicFilters_EXPORT Image MultiLabelSTAPLE(const Image& image1, uint64_t labelForUndecidedPixels = std::numeric_limits<uint64_t>::max(), float terminationUpdateThreshold = 1e-5f, unsigned int maximumNumberOfIterations = std::numeric_limits<unsigned int>::max(), std::vector<double> priorProbabilities = std::vector<double>());
 
SITKBasicFilters_EXPORT Image MultiLabelSTAPLE(const Image& image1, const Image& image2, uint64_t labelForUndecidedPixels = std::numeric_limits<uint64_t>::max(), float terminationUpdateThreshold = 1e-5f, unsigned int maximumNumberOfIterations = std::numeric_limits<unsigned int>::max(), std::vector<double> priorProbabilities = std::vector<double>());
 
SITKBasicFilters_EXPORT Image MultiLabelSTAPLE(const Image& image1, const Image& image2, const Image& image3, uint64_t labelForUndecidedPixels = std::numeric_limits<uint64_t>::max(), float terminationUpdateThreshold = 1e-5f, unsigned int maximumNumberOfIterations = std::numeric_limits<unsigned int>::max(), std::vector<double> priorProbabilities = std::vector<double>());
 
SITKBasicFilters_EXPORT Image MultiLabelSTAPLE(const Image& image1, const Image& image2, const Image& image3, const Image& image4, uint64_t labelForUndecidedPixels = std::numeric_limits<uint64_t>::max(), float terminationUpdateThreshold = 1e-5f, unsigned int maximumNumberOfIterations = std::numeric_limits<unsigned int>::max(), std::vector<double> priorProbabilities = std::vector<double>());
 
SITKBasicFilters_EXPORT Image MultiLabelSTAPLE(const Image& image1, const Image& image2, const Image& image3, const Image& image4, const Image& image5, uint64_t labelForUndecidedPixels = std::numeric_limits<uint64_t>::max(), float terminationUpdateThreshold = 1e-5f, unsigned int maximumNumberOfIterations = std::numeric_limits<unsigned int>::max(), std::vector<double> priorProbabilities = std::vector<double>());

 
}
#endif