itk::simple::LabelShapeStatisticsImageFilter Class Reference

Converts a label image to a label map and valuates the shape attributes. More...

#include <sitkLabelShapeStatisticsImageFilter.h>

Inheritance diagram for itk::simple::LabelShapeStatisticsImageFilter:

Collaboration diagram for itk::simple::LabelShapeStatisticsImageFilter:

Detailed Description

Converts a label image to a label map and valuates the shape attributes.

A convenient class that converts a label image to a label map and valuates the shape attribute at once.

This implementation was taken from the Insight Journal paper: https://doi.org/10.54294/q6auw4

Author

Gaetan Lehmann. Biologie du Developpement et de la Reproduction, INRA de Jouy-en-Josas, France.

See also

ShapeLabelObject , LabelShapeOpeningImageFilter , LabelStatisticsOpeningImageFilter

itk::LabelImageToShapeLabelMapFilter for the Doxygen on the original ITK class.

Definition at line 49 of file sitkLabelShapeStatisticsImageFilter.h.

Public Types
using	PixelIDTypeList = IntegerPixelIDTypeList
using	Self = LabelShapeStatisticsImageFilter
Public Types inherited from itk::simple::ImageFilter
using	Self = ImageFilter
Public Types inherited from itk::simple::ProcessObject
using	Self = ProcessObject

Public Member Functions
void	ComputeFeretDiameterOff ()
void	ComputeFeretDiameterOn ()
void	ComputeOrientedBoundingBoxOff ()
void	ComputeOrientedBoundingBoxOn ()
void	ComputePerimeterOff ()
void	ComputePerimeterOn ()
void	Execute (const Image &image1)
double	GetBackgroundValue () const
std::vector< unsigned int >	GetBoundingBox (int64_t label) const
std::vector< double >	GetCentroid (int64_t label) const
bool	GetComputeFeretDiameter () const
bool	GetComputeOrientedBoundingBox () const
bool	GetComputePerimeter () const
double	GetElongation (int64_t label) const
std::vector< double >	GetEquivalentEllipsoidDiameter (int64_t label) const
double	GetEquivalentSphericalPerimeter (int64_t label) const
double	GetEquivalentSphericalRadius (int64_t label) const
double	GetFeretDiameter (int64_t label) const
double	GetFlatness (int64_t label) const
std::vector< unsigned int >	GetIndexes (int64_t label) const
std::vector< int64_t >	GetLabels () const
std::string	GetName () const
uint64_t	GetNumberOfLabels ()
uint64_t	GetNumberOfPixels (int64_t label) const
uint64_t	GetNumberOfPixelsOnBorder (int64_t label) const
std::vector< double >	GetOrientedBoundingBoxDirection (int64_t label) const
std::vector< double >	GetOrientedBoundingBoxOrigin (int64_t label) const
std::vector< double >	GetOrientedBoundingBoxSize (int64_t label) const
std::vector< double >	GetOrientedBoundingBoxVertices (int64_t label) const
double	GetPerimeter (int64_t label) const
double	GetPerimeterOnBorder (int64_t label) const
double	GetPerimeterOnBorderRatio (int64_t label) const
double	GetPhysicalSize (int64_t label) const
std::vector< double >	GetPrincipalAxes (int64_t label) const
std::vector< double >	GetPrincipalMoments (int64_t label) const
std::vector< unsigned int >	GetRegion (int64_t label) const
std::vector< unsigned int >	GetRLEIndexes (int64_t label) const
double	GetRoundness (int64_t label) const
bool	HasLabel (int64_t label)
	LabelShapeStatisticsImageFilter ()
void	SetBackgroundValue (double BackgroundValue)
void	SetComputeFeretDiameter (bool ComputeFeretDiameter)
void	SetComputeOrientedBoundingBox (bool ComputeOrientedBoundingBox)
void	SetComputePerimeter (bool ComputePerimeter)
std::string	ToString () const
virtual	~LabelShapeStatisticsImageFilter ()
Public Member Functions inherited from itk::simple::ImageFilter
	ImageFilter ()
virtual	~ImageFilter ()=0
Public Member Functions inherited from itk::simple::ProcessObject
virtual void	Abort ()
virtual int	AddCommand (itk::simple::EventEnum event, const std::function< void()> &func)
	Directly add a callback to observe an event.
virtual int	AddCommand (itk::simple::EventEnum event, itk::simple::Command &cmd)
	Add a Command Object to observer the event.
virtual float	GetProgress () const
	An Active Measurement of the progress of execution.
virtual bool	HasCommand (itk::simple::EventEnum event) const
	Query of this object has any registered commands for event.
	ProcessObject ()
virtual void	RemoveAllCommands ()
	Remove all registered commands.
virtual	~ProcessObject ()
virtual void	DebugOn ()
virtual void	DebugOff ()
virtual bool	GetDebug () const
virtual void	SetDebug (bool debugFlag)
virtual void	SetNumberOfThreads (unsigned int n)
virtual unsigned int	GetNumberOfThreads () const
virtual void	SetNumberOfWorkUnits (unsigned int n)
virtual unsigned int	GetNumberOfWorkUnits () const

Private Types
using	MemberFunctionType = void (Self::*)(const Image &image1)

Private Member Functions
template<class TImageType>
void	ExecuteInternal (const Image &image1)

Static Private Member Functions
static const detail::MemberFunctionFactory< MemberFunctionType > &	GetMemberFunctionFactory ()

Private Attributes
double	m_BackgroundValue { 0 }
bool	m_ComputeFeretDiameter { false }
bool	m_ComputeOrientedBoundingBox { false }
bool	m_ComputePerimeter { true }
std::unique_ptr< itk::ProcessObject, ProcessObjectDeleter >	m_Filter {nullptr}
std::vector< int64_t >	m_Labels { std::vector<int64_t>() }
std::function< std::vector< unsigned int >(int64_t)>	m_pfGetBoundingBox
std::function< std::vector< double >(int64_t)>	m_pfGetCentroid
std::function< double(int64_t)>	m_pfGetElongation
std::function< std::vector< double >(int64_t)>	m_pfGetEquivalentEllipsoidDiameter
std::function< double(int64_t)>	m_pfGetEquivalentSphericalPerimeter
std::function< double(int64_t)>	m_pfGetEquivalentSphericalRadius
std::function< double(int64_t)>	m_pfGetFeretDiameter
std::function< double(int64_t)>	m_pfGetFlatness
std::function< std::vector< unsigned int >(int64_t)>	m_pfGetIndexes
std::function< uint64_t(int64_t)>	m_pfGetNumberOfPixels
std::function< uint64_t(int64_t)>	m_pfGetNumberOfPixelsOnBorder
std::function< std::vector< double >(int64_t)>	m_pfGetOrientedBoundingBoxDirection
std::function< std::vector< double >(int64_t)>	m_pfGetOrientedBoundingBoxOrigin
std::function< std::vector< double >(int64_t)>	m_pfGetOrientedBoundingBoxSize
std::function< std::vector< double >(int64_t)>	m_pfGetOrientedBoundingBoxVertices
std::function< double(int64_t)>	m_pfGetPerimeter
std::function< double(int64_t)>	m_pfGetPerimeterOnBorder
std::function< double(int64_t)>	m_pfGetPerimeterOnBorderRatio
std::function< double(int64_t)>	m_pfGetPhysicalSize
std::function< std::vector< double >(int64_t)>	m_pfGetPrincipalAxes
std::function< std::vector< double >(int64_t)>	m_pfGetPrincipalMoments
std::function< std::vector< unsigned int >(int64_t)>	m_pfGetRegion
std::function< std::vector< unsigned int >(int64_t)>	m_pfGetRLEIndexes
std::function< double(int64_t)>	m_pfGetRoundness

Friends
struct	detail::MemberFunctionAddressor< MemberFunctionType >

Additional Inherited Members
Static Public Member Functions inherited from itk::simple::ProcessObject
static bool	GetGlobalDefaultDebug ()
static void	GlobalDefaultDebugOff ()
static void	GlobalDefaultDebugOn ()
static void	SetGlobalDefaultDebug (bool debugFlag)
static void	GlobalWarningDisplayOn ()
static void	GlobalWarningDisplayOff ()
static void	SetGlobalWarningDisplay (bool flag)
static bool	GetGlobalWarningDisplay ()
static double	GetGlobalDefaultCoordinateTolerance ()
	Access the global tolerance to determine congruent spaces.
static void	SetGlobalDefaultCoordinateTolerance (double)
	Access the global tolerance to determine congruent spaces.
static double	GetGlobalDefaultDirectionTolerance ()
	Access the global tolerance to determine congruent spaces.
static void	SetGlobalDefaultDirectionTolerance (double)
	Access the global tolerance to determine congruent spaces.
static bool	SetGlobalDefaultThreader (const std::string &threader)
	Set/Get the default threader used for process objects.
static std::string	GetGlobalDefaultThreader ()
	Set/Get the default threader used for process objects.
static void	SetGlobalDefaultNumberOfThreads (unsigned int n)
static unsigned int	GetGlobalDefaultNumberOfThreads ()
	Set/Get the default threader used for process objects.
Protected Member Functions inherited from itk::simple::ImageFilter
void	CheckImageMatchingDimension (const Image &image1, const Image &image2, const std::string &image2Name)
void	CheckImageMatchingPixelType (const Image &image1, const Image &image2, const std::string &image2Name)
void	CheckImageMatchingSize (const Image &image1, const Image &image2, const std::string &image2Name)
Protected Member Functions inherited from itk::simple::ProcessObject
virtual unsigned long	AddITKObserver (const itk::EventObject &, itk::Command *)
virtual itk::ProcessObject *	GetActiveProcess ()
virtual void	OnActiveProcessDelete ()
virtual void	onCommandDelete (const itk::simple::Command *cmd) noexcept
virtual void	PreUpdate (itk::ProcessObject *p)
virtual void	RemoveITKObserver (EventCommand &e)
Protected Member Functions inherited from itk::simple::NonCopyable
	NonCopyable ()=default
	NonCopyable (const NonCopyable &)=delete
NonCopyable &	operator= (const NonCopyable &)=delete
Static Protected Member Functions inherited from itk::simple::ImageFilter
template<class TImageType>
static void	FixNonZeroIndex (TImageType *img)
Static Protected Member Functions inherited from itk::simple::ProcessObject
template<class TImageType>
static TImageType::ConstPointer	CastImageToITK (const Image &img)
template<class TPixelType, unsigned int VImageDimension, unsigned int VLength, template< typename, unsigned int > class TVector>
static Image	CastITKToImage (itk::Image< TVector< TPixelType, VLength >, VImageDimension > *img)
template<unsigned int VImageDimension, unsigned int VLength, template< unsigned int > class TVector>
static Image	CastITKToImage (itk::Image< TVector< VLength >, VImageDimension > *img)
template<class TImageType>
static Image	CastITKToImage (TImageType *img)
static const itk::EventObject &	GetITKEventObject (EventEnum e)
template<typename T>
static std::ostream &	ToStringHelper (std::ostream &os, const T &v)
static std::ostream &	ToStringHelper (std::ostream &os, const char &v)
static std::ostream &	ToStringHelper (std::ostream &os, const signed char &v)
static std::ostream &	ToStringHelper (std::ostream &os, const unsigned char &v)

Member Typedef Documentation

MemberFunctionType

using itk::simple::LabelShapeStatisticsImageFilter::MemberFunctionType = void (Self::*)(const Image &image1)

private

Setup for member function dispatching

Definition at line 366 of file sitkLabelShapeStatisticsImageFilter.h.

PixelIDTypeList

using itk::simple::LabelShapeStatisticsImageFilter::PixelIDTypeList = IntegerPixelIDTypeList

Define the pixels types supported by this filter

Definition at line 61 of file sitkLabelShapeStatisticsImageFilter.h.

Self

using itk::simple::LabelShapeStatisticsImageFilter::Self = LabelShapeStatisticsImageFilter

Definition at line 51 of file sitkLabelShapeStatisticsImageFilter.h.

Constructor & Destructor Documentation

~LabelShapeStatisticsImageFilter()

virtual itk::simple::LabelShapeStatisticsImageFilter::~LabelShapeStatisticsImageFilter ( )

virtual

Destructor

LabelShapeStatisticsImageFilter()

itk::simple::LabelShapeStatisticsImageFilter::LabelShapeStatisticsImageFilter

(

)

Default Constructor that takes no arguments and initializes default parameters

Member Function Documentation

ComputeFeretDiameterOff()

void itk::simple::LabelShapeStatisticsImageFilter::ComputeFeretDiameterOff ( )

inline

Definition at line 91 of file sitkLabelShapeStatisticsImageFilter.h.

References SetComputeFeretDiameter().

ComputeFeretDiameterOn()

void itk::simple::LabelShapeStatisticsImageFilter::ComputeFeretDiameterOn ( )

inline

Set the value of ComputeFeretDiameter to true or false respectfully.

Definition at line 89 of file sitkLabelShapeStatisticsImageFilter.h.

References SetComputeFeretDiameter().

ComputeOrientedBoundingBoxOff()

void itk::simple::LabelShapeStatisticsImageFilter::ComputeOrientedBoundingBoxOff ( )

inline

Definition at line 133 of file sitkLabelShapeStatisticsImageFilter.h.

References SetComputeOrientedBoundingBox().

ComputeOrientedBoundingBoxOn()

void itk::simple::LabelShapeStatisticsImageFilter::ComputeOrientedBoundingBoxOn ( )

inline

Set the value of ComputeOrientedBoundingBox to true or false respectfully.

Definition at line 131 of file sitkLabelShapeStatisticsImageFilter.h.

References SetComputeOrientedBoundingBox().

ComputePerimeterOff()

void itk::simple::LabelShapeStatisticsImageFilter::ComputePerimeterOff ( )

inline

Definition at line 112 of file sitkLabelShapeStatisticsImageFilter.h.

References SetComputePerimeter().

ComputePerimeterOn()

void itk::simple::LabelShapeStatisticsImageFilter::ComputePerimeterOn ( )

inline

Set the value of ComputePerimeter to true or false respectfully.

Definition at line 110 of file sitkLabelShapeStatisticsImageFilter.h.

References SetComputePerimeter().

Execute()

void itk::simple::LabelShapeStatisticsImageFilter::Execute

(

const Image &

image1

)

Execute the filter on the input image

ExecuteInternal()

template<class TImageType>

void itk::simple::LabelShapeStatisticsImageFilter::ExecuteInternal ( const Image & image1 )

private

Referenced by detail::MemberFunctionAddressor< MemberFunctionType >.

GetBackgroundValue()

double itk::simple::LabelShapeStatisticsImageFilter::GetBackgroundValue ( ) const

inline

Set/Get the value used as "background" in the output image. Defaults to NumericTraits<PixelType>::NonpositiveMin() .

Definition at line 76 of file sitkLabelShapeStatisticsImageFilter.h.

References m_BackgroundValue.

GetBoundingBox()

std::vector< unsigned int > itk::simple::LabelShapeStatisticsImageFilter::GetBoundingBox ( int64_t label ) const

inline

Get the bounding box of a labeled object. The bounding box is returned following the common convention for returning an itk::ImageRegion as a 1 dimensional array containing the index values followed by the size values. For example, a 2D image region would have the array

\[[x, y, width, height]\]

.

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 149 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetBoundingBox.

GetCentroid()

std::vector< double > itk::simple::LabelShapeStatisticsImageFilter::GetCentroid ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 165 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetCentroid.

GetComputeFeretDiameter()

bool itk::simple::LabelShapeStatisticsImageFilter::GetComputeFeretDiameter ( ) const

inline

Set/Get whether the maximum Feret diameter should be computed or not. Default value is false, because of the high computation time required.

Definition at line 97 of file sitkLabelShapeStatisticsImageFilter.h.

References m_ComputeFeretDiameter.

GetComputeOrientedBoundingBox()

bool itk::simple::LabelShapeStatisticsImageFilter::GetComputeOrientedBoundingBox ( ) const

inline

Set/Get whether the oriented bounding box should be computed or not. Default value is false because of potential memory consumption issues with sparse labels.

Definition at line 139 of file sitkLabelShapeStatisticsImageFilter.h.

References m_ComputeOrientedBoundingBox.

GetComputePerimeter()

bool itk::simple::LabelShapeStatisticsImageFilter::GetComputePerimeter ( ) const

inline

Set/Get whether the perimeter should be computed or not. Default value is false, because of the high computation time required.

Definition at line 118 of file sitkLabelShapeStatisticsImageFilter.h.

References m_ComputePerimeter.

GetElongation()

double itk::simple::LabelShapeStatisticsImageFilter::GetElongation ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 173 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetElongation.

GetEquivalentEllipsoidDiameter()

std::vector< double > itk::simple::LabelShapeStatisticsImageFilter::GetEquivalentEllipsoidDiameter ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 181 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetEquivalentEllipsoidDiameter.

GetEquivalentSphericalPerimeter()

double itk::simple::LabelShapeStatisticsImageFilter::GetEquivalentSphericalPerimeter ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 189 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetEquivalentSphericalPerimeter.

GetEquivalentSphericalRadius()

double itk::simple::LabelShapeStatisticsImageFilter::GetEquivalentSphericalRadius ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 197 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetEquivalentSphericalRadius.

GetFeretDiameter()

double itk::simple::LabelShapeStatisticsImageFilter::GetFeretDiameter ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 205 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetFeretDiameter.

GetFlatness()

double itk::simple::LabelShapeStatisticsImageFilter::GetFlatness ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 213 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetFlatness.

GetIndexes()

std::vector< unsigned int > itk::simple::LabelShapeStatisticsImageFilter::GetIndexes ( int64_t label ) const

inline

Get an array of indexes for pixels with the label value.

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 333 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetIndexes.

GetLabels()

std::vector< int64_t > itk::simple::LabelShapeStatisticsImageFilter::GetLabels ( ) const

inline

This is a measurement. Its value is updated in the Execute methods, so the value will only be valid after an execution.

Definition at line 220 of file sitkLabelShapeStatisticsImageFilter.h.

References m_Labels.

GetMemberFunctionFactory()

static const detail::MemberFunctionFactory< MemberFunctionType > & itk::simple::LabelShapeStatisticsImageFilter::GetMemberFunctionFactory ( )

staticprivate

GetName()

std::string itk::simple::LabelShapeStatisticsImageFilter::GetName ( ) const

inlinevirtual

Name of this class

Implements itk::simple::ProcessObject.

Definition at line 345 of file sitkLabelShapeStatisticsImageFilter.h.

GetNumberOfLabels()

uint64_t itk::simple::LabelShapeStatisticsImageFilter::GetNumberOfLabels

(

)

Return the number of labels after execution.

GetNumberOfPixels()

uint64_t itk::simple::LabelShapeStatisticsImageFilter::GetNumberOfPixels ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 228 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetNumberOfPixels.

GetNumberOfPixelsOnBorder()

uint64_t itk::simple::LabelShapeStatisticsImageFilter::GetNumberOfPixelsOnBorder ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 236 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetNumberOfPixelsOnBorder.

GetOrientedBoundingBoxDirection()

std::vector< double > itk::simple::LabelShapeStatisticsImageFilter::GetOrientedBoundingBoxDirection ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 316 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetOrientedBoundingBoxDirection.

GetOrientedBoundingBoxOrigin()

std::vector< double > itk::simple::LabelShapeStatisticsImageFilter::GetOrientedBoundingBoxOrigin ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 308 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetOrientedBoundingBoxOrigin.

GetOrientedBoundingBoxSize()

std::vector< double > itk::simple::LabelShapeStatisticsImageFilter::GetOrientedBoundingBoxSize ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 300 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetOrientedBoundingBoxSize.

GetOrientedBoundingBoxVertices()

std::vector< double > itk::simple::LabelShapeStatisticsImageFilter::GetOrientedBoundingBoxVertices ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 324 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetOrientedBoundingBoxVertices.

GetPerimeter()

double itk::simple::LabelShapeStatisticsImageFilter::GetPerimeter ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 244 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetPerimeter.

GetPerimeterOnBorder()

double itk::simple::LabelShapeStatisticsImageFilter::GetPerimeterOnBorder ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 252 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetPerimeterOnBorder.

GetPerimeterOnBorderRatio()

double itk::simple::LabelShapeStatisticsImageFilter::GetPerimeterOnBorderRatio ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 260 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetPerimeterOnBorderRatio.

GetPhysicalSize()

double itk::simple::LabelShapeStatisticsImageFilter::GetPhysicalSize ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 268 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetPhysicalSize.

GetPrincipalAxes()

std::vector< double > itk::simple::LabelShapeStatisticsImageFilter::GetPrincipalAxes ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 276 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetPrincipalAxes.

GetPrincipalMoments()

std::vector< double > itk::simple::LabelShapeStatisticsImageFilter::GetPrincipalMoments ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 284 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetPrincipalMoments.

GetRegion()

std::vector< unsigned int > itk::simple::LabelShapeStatisticsImageFilter::GetRegion ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 157 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetRegion.

GetRLEIndexes()

std::vector< unsigned int > itk::simple::LabelShapeStatisticsImageFilter::GetRLEIndexes ( int64_t label ) const

inline

Get an array of run-length encoding (RLE) indexes for pixels with the label value. The array is the index of a starting line, followed by the length repeated. The length of the array is divisible by the image's dimension + 1. For example for a 2D image the array [ 2, 3, 2] would encode the two indexes [2,3] and [3,3].

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 342 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetRLEIndexes.

GetRoundness()

double itk::simple::LabelShapeStatisticsImageFilter::GetRoundness ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 292 of file sitkLabelShapeStatisticsImageFilter.h.

References m_pfGetRoundness.

HasLabel()

bool itk::simple::LabelShapeStatisticsImageFilter::HasLabel

(

int64_t

label

)

Does the specified label exist? Can only be called after a call a call to Update().

SetBackgroundValue()

void itk::simple::LabelShapeStatisticsImageFilter::SetBackgroundValue ( double BackgroundValue )

inline

Set/Get the value used as "background" in the output image. Defaults to NumericTraits<PixelType>::NonpositiveMin() .

Definition at line 70 of file sitkLabelShapeStatisticsImageFilter.h.

References m_BackgroundValue.

SetComputeFeretDiameter()

void itk::simple::LabelShapeStatisticsImageFilter::SetComputeFeretDiameter ( bool ComputeFeretDiameter )

inline

Set/Get whether the maximum Feret diameter should be computed or not. Default value is false, because of the high computation time required.

Definition at line 84 of file sitkLabelShapeStatisticsImageFilter.h.

References m_ComputeFeretDiameter.

Referenced by ComputeFeretDiameterOff(), and ComputeFeretDiameterOn().

SetComputeOrientedBoundingBox()

void itk::simple::LabelShapeStatisticsImageFilter::SetComputeOrientedBoundingBox ( bool ComputeOrientedBoundingBox )

inline

Set/Get whether the oriented bounding box should be computed or not. Default value is false because of potential memory consumption issues with sparse labels.

Definition at line 126 of file sitkLabelShapeStatisticsImageFilter.h.

References m_ComputeOrientedBoundingBox.

Referenced by ComputeOrientedBoundingBoxOff(), and ComputeOrientedBoundingBoxOn().

SetComputePerimeter()

void itk::simple::LabelShapeStatisticsImageFilter::SetComputePerimeter ( bool ComputePerimeter )

inline

Set/Get whether the perimeter should be computed or not. Default value is false, because of the high computation time required.

Definition at line 105 of file sitkLabelShapeStatisticsImageFilter.h.

References m_ComputePerimeter.

Referenced by ComputePerimeterOff(), and ComputePerimeterOn().

ToString()

std::string itk::simple::LabelShapeStatisticsImageFilter::ToString ( ) const

virtual

Print ourselves out

Reimplemented from itk::simple::ProcessObject.

Friends And Related Symbol Documentation

detail::MemberFunctionAddressor< MemberFunctionType >

friend struct detail::MemberFunctionAddressor< MemberFunctionType >

friend

Definition at line 367 of file sitkLabelShapeStatisticsImageFilter.h.

References ExecuteInternal().

Member Data Documentation

m_BackgroundValue

double itk::simple::LabelShapeStatisticsImageFilter::m_BackgroundValue { 0 }

private

Definition at line 372 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetBackgroundValue(), and SetBackgroundValue().

m_ComputeFeretDiameter

bool itk::simple::LabelShapeStatisticsImageFilter::m_ComputeFeretDiameter { false }

private

Definition at line 374 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetComputeFeretDiameter(), and SetComputeFeretDiameter().

m_ComputeOrientedBoundingBox

bool itk::simple::LabelShapeStatisticsImageFilter::m_ComputeOrientedBoundingBox { false }

private

Definition at line 378 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetComputeOrientedBoundingBox(), and SetComputeOrientedBoundingBox().

m_ComputePerimeter

bool itk::simple::LabelShapeStatisticsImageFilter::m_ComputePerimeter { true }

private

Definition at line 376 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetComputePerimeter(), and SetComputePerimeter().

m_Filter

std::unique_ptr<itk::ProcessObject, ProcessObjectDeleter> itk::simple::LabelShapeStatisticsImageFilter::m_Filter {nullptr}

private

Definition at line 410 of file sitkLabelShapeStatisticsImageFilter.h.

m_Labels

std::vector<int64_t> itk::simple::LabelShapeStatisticsImageFilter::m_Labels { std::vector<int64_t>() }

private

Definition at line 391 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetLabels().

m_pfGetBoundingBox

std::function<std::vector<unsigned int>(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetBoundingBox

private

Definition at line 382 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetBoundingBox().

m_pfGetCentroid

std::function<std::vector<double>(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetCentroid

private

Definition at line 384 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetCentroid().

m_pfGetElongation

std::function<double(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetElongation

private

Definition at line 385 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetElongation().

m_pfGetEquivalentEllipsoidDiameter

std::function<std::vector<double>(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetEquivalentEllipsoidDiameter

private

Definition at line 386 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetEquivalentEllipsoidDiameter().

m_pfGetEquivalentSphericalPerimeter

std::function<double(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetEquivalentSphericalPerimeter

private

Definition at line 387 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetEquivalentSphericalPerimeter().

m_pfGetEquivalentSphericalRadius

std::function<double(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetEquivalentSphericalRadius

private

Definition at line 388 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetEquivalentSphericalRadius().

m_pfGetFeretDiameter

std::function<double(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetFeretDiameter

private

Definition at line 389 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetFeretDiameter().

m_pfGetFlatness

std::function<double(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetFlatness

private

Definition at line 390 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetFlatness().

m_pfGetIndexes

std::function<std::vector<unsigned int>(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetIndexes

private

Definition at line 405 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetIndexes().

m_pfGetNumberOfPixels

std::function<uint64_t(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetNumberOfPixels

private

Definition at line 392 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetNumberOfPixels().

m_pfGetNumberOfPixelsOnBorder

std::function<uint64_t(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetNumberOfPixelsOnBorder

private

Definition at line 393 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetNumberOfPixelsOnBorder().

m_pfGetOrientedBoundingBoxDirection

std::function<std::vector<double>(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetOrientedBoundingBoxDirection

private

Definition at line 403 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetOrientedBoundingBoxDirection().

m_pfGetOrientedBoundingBoxOrigin

std::function<std::vector<double>(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetOrientedBoundingBoxOrigin

private

Definition at line 402 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetOrientedBoundingBoxOrigin().

m_pfGetOrientedBoundingBoxSize

std::function<std::vector<double>(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetOrientedBoundingBoxSize

private

Definition at line 401 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetOrientedBoundingBoxSize().

m_pfGetOrientedBoundingBoxVertices

std::function<std::vector<double>(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetOrientedBoundingBoxVertices

private

Definition at line 404 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetOrientedBoundingBoxVertices().

m_pfGetPerimeter

std::function<double(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetPerimeter

private

Definition at line 394 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetPerimeter().

m_pfGetPerimeterOnBorder

std::function<double(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetPerimeterOnBorder

private

Definition at line 395 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetPerimeterOnBorder().

m_pfGetPerimeterOnBorderRatio

std::function<double(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetPerimeterOnBorderRatio

private

Definition at line 396 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetPerimeterOnBorderRatio().

m_pfGetPhysicalSize

std::function<double(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetPhysicalSize

private

Definition at line 397 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetPhysicalSize().

m_pfGetPrincipalAxes

std::function<std::vector<double>(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetPrincipalAxes

private

Definition at line 398 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetPrincipalAxes().

m_pfGetPrincipalMoments

std::function<std::vector<double>(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetPrincipalMoments

private

Definition at line 399 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetPrincipalMoments().

m_pfGetRegion

std::function<std::vector<unsigned int>(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetRegion

private

Definition at line 383 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetRegion().

m_pfGetRLEIndexes

std::function<std::vector<unsigned int>(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetRLEIndexes

private

Definition at line 406 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetRLEIndexes().

m_pfGetRoundness

std::function<double(int64_t)> itk::simple::LabelShapeStatisticsImageFilter::m_pfGetRoundness

private

Definition at line 400 of file sitkLabelShapeStatisticsImageFilter.h.

Referenced by GetRoundness().

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The documentation for this class was generated from the following file:

• sitkLabelShapeStatisticsImageFilter.h