a convenient class to convert a label image to a label map and valuate the statistics attributes at once More...

#include <sitkLabelIntensityStatisticsImageFilter.h>

Inheritance diagram for itk::simple::LabelIntensityStatisticsImageFilter:

Collaboration diagram for itk::simple::LabelIntensityStatisticsImageFilter:

Detailed Description

a convenient class to convert a label image to a label map and valuate the statistics attributes at once

Author: Gaetan Lehmann. Biologie du Developpement et de la Reproduction, INRA de Jouy-en-Josas, France.

This implementation was taken from the Insight Journal paper: https://doi.org/10.54294/q6auw4

See also: StatisticsLabelObject , LabelStatisticsOpeningImageFilter , LabelStatisticsOpeningImageFilter; itk::LabelImageToStatisticsLabelMapFilter for the Doxygen on the original ITK class.

Definition at line 48 of file sitkLabelIntensityStatisticsImageFilter.h.

Public Types
using	PixelIDTypeList = IntegerLabelPixelIDTypeList

using	Self = LabelIntensityStatisticsImageFilter

Public Types inherited from itk::simple::ImageFilter
using	Self = ImageFilter

Public Types inherited from itk::simple::ProcessObject
using	Self = ProcessObject

Public Member Functions
void	ComputeFeretDiameterOff ()

void	ComputeFeretDiameterOn ()

void	ComputePerimeterOff ()

void	ComputePerimeterOn ()

void	Execute (const Image &image, const Image &featureImage)

double	GetBackgroundValue () const

std::vector< unsigned int >	GetBoundingBox (int64_t label) const

std::vector< double >	GetCenterOfGravity (int64_t label) const

std::vector< double >	GetCentroid (int64_t label) const

bool	GetComputeFeretDiameter () const

bool	GetComputePerimeter () const

double	GetElongation (int64_t label) const

std::vector< double >	GetEquivalentEllipsoidDiameter (int64_t label) const

double	GetEquivalentSphericalPerimeter (int64_t label) const

double	GetEquivalentSphericalRadius (int64_t label) const

double	GetFeretDiameter (int64_t label) const

double	GetFlatness (int64_t label) const

double	GetKurtosis (int64_t label) const

std::vector< int64_t >	GetLabels () const

double	GetMaximum (int64_t label) const

std::vector< uint32_t >	GetMaximumIndex (int64_t label) const

double	GetMean (int64_t label) const

double	GetMedian (int64_t label) const

double	GetMinimum (int64_t label) const

std::vector< uint32_t >	GetMinimumIndex (int64_t label) const

std::string	GetName () const

uint32_t	GetNumberOfBins () const

uint64_t	GetNumberOfLabels ()

uint64_t	GetNumberOfPixels (int64_t label) const

uint64_t	GetNumberOfPixelsOnBorder (int64_t label) const

double	GetPerimeter (int64_t label) const

double	GetPerimeterOnBorder (int64_t label) const

double	GetPerimeterOnBorderRatio (int64_t label) const

double	GetPhysicalSize (int64_t label) const

std::vector< double >	GetPrincipalAxes (int64_t label) const

std::vector< double >	GetPrincipalMoments (int64_t label) const

std::vector< unsigned int >	GetRegion (int64_t label) const

double	GetRoundness (int64_t label) const

double	GetSkewness (int64_t label) const

double	GetStandardDeviation (int64_t label) const

double	GetSum (int64_t label) const

double	GetVariance (int64_t label) const

double	GetWeightedElongation (int64_t label) const

double	GetWeightedFlatness (int64_t label) const

std::vector< double >	GetWeightedPrincipalAxes (int64_t label) const

std::vector< double >	GetWeightedPrincipalMoments (int64_t label) const

bool	HasLabel (int64_t label)

	LabelIntensityStatisticsImageFilter ()

void	SetBackgroundValue (double BackgroundValue)

void	SetComputeFeretDiameter (bool ComputeFeretDiameter)

void	SetComputePerimeter (bool ComputePerimeter)

void	SetNumberOfBins (uint32_t NumberOfBins)

std::string	ToString () const

virtual	~LabelIntensityStatisticsImageFilter ()

Public Member Functions inherited from itk::simple::ImageFilter
	ImageFilter ()

virtual	~ImageFilter ()=0

Public Member Functions inherited from itk::simple::ProcessObject
virtual void	Abort ()

virtual int	AddCommand (itk::simple::EventEnum event, const std::function< void()> &func)
	Directly add a callback to observe an event.

virtual int	AddCommand (itk::simple::EventEnum event, itk::simple::Command &cmd)
	Add a Command Object to observer the event.

virtual float	GetProgress () const
	An Active Measurement of the progress of execution.

virtual bool	HasCommand (itk::simple::EventEnum event) const
	Query of this object has any registered commands for event.

	ProcessObject ()

virtual void	RemoveAllCommands ()
	Remove all registered commands.

virtual	~ProcessObject ()

virtual void	DebugOn ()

virtual void	DebugOff ()

virtual bool	GetDebug () const

virtual void	SetDebug (bool debugFlag)

virtual void	SetNumberOfThreads (unsigned int n)

virtual unsigned int	GetNumberOfThreads () const

virtual void	SetNumberOfWorkUnits (unsigned int n)

virtual unsigned int	GetNumberOfWorkUnits () const

Private Types
using	MemberFunctionType

Private Member Functions
template<class TImageType1, class TImageType2>
void	DualExecuteInternal (const Image image, const Image featureImage)

Static Private Member Functions
static const detail::DualMemberFunctionFactory< MemberFunctionType > &	GetMemberFunctionFactory ()

Private Attributes
double	m_BackgroundValue { 0 }

bool	m_ComputeFeretDiameter { false }

bool	m_ComputePerimeter { true }

std::unique_ptr< itk::ProcessObject, ProcessObjectDeleter >	m_Filter {nullptr}

std::vector< int64_t >	m_Labels { std::vector<int64_t>() }

uint32_t	m_NumberOfBins { 128u }

std::function< std::vector< unsigned int >(int64_t)>	m_pfGetBoundingBox

std::function< std::vector< double >(int64_t)>	m_pfGetCenterOfGravity

std::function< std::vector< double >(int64_t)>	m_pfGetCentroid

std::function< double(int64_t)>	m_pfGetElongation

std::function< std::vector< double >(int64_t)>	m_pfGetEquivalentEllipsoidDiameter

std::function< double(int64_t)>	m_pfGetEquivalentSphericalPerimeter

std::function< double(int64_t)>	m_pfGetEquivalentSphericalRadius

std::function< double(int64_t)>	m_pfGetFeretDiameter

std::function< double(int64_t)>	m_pfGetFlatness

std::function< double(int64_t)>	m_pfGetKurtosis

std::function< double(int64_t)>	m_pfGetMaximum

std::function< std::vector< uint32_t >(int64_t)>	m_pfGetMaximumIndex

std::function< double(int64_t)>	m_pfGetMean

std::function< double(int64_t)>	m_pfGetMedian

std::function< double(int64_t)>	m_pfGetMinimum

std::function< std::vector< uint32_t >(int64_t)>	m_pfGetMinimumIndex

std::function< uint64_t(int64_t)>	m_pfGetNumberOfPixels

std::function< uint64_t(int64_t)>	m_pfGetNumberOfPixelsOnBorder

std::function< double(int64_t)>	m_pfGetPerimeter

std::function< double(int64_t)>	m_pfGetPerimeterOnBorder

std::function< double(int64_t)>	m_pfGetPerimeterOnBorderRatio

std::function< double(int64_t)>	m_pfGetPhysicalSize

std::function< std::vector< double >(int64_t)>	m_pfGetPrincipalAxes

std::function< std::vector< double >(int64_t)>	m_pfGetPrincipalMoments

std::function< std::vector< unsigned int >(int64_t)>	m_pfGetRegion

std::function< double(int64_t)>	m_pfGetRoundness

std::function< double(int64_t)>	m_pfGetSkewness

std::function< double(int64_t)>	m_pfGetStandardDeviation

std::function< double(int64_t)>	m_pfGetSum

std::function< double(int64_t)>	m_pfGetVariance

std::function< double(int64_t)>	m_pfGetWeightedElongation

std::function< double(int64_t)>	m_pfGetWeightedFlatness

std::function< std::vector< double >(int64_t)>	m_pfGetWeightedPrincipalAxes

std::function< std::vector< double >(int64_t)>	m_pfGetWeightedPrincipalMoments

Friends
struct	detail::DualExecuteInternalAddressor< MemberFunctionType >

Additional Inherited Members
Static Public Member Functions inherited from itk::simple::ProcessObject
static bool	GetGlobalDefaultDebug ()

static void	GlobalDefaultDebugOff ()

static void	GlobalDefaultDebugOn ()

static void	SetGlobalDefaultDebug (bool debugFlag)

static void	GlobalWarningDisplayOn ()

static void	GlobalWarningDisplayOff ()

static void	SetGlobalWarningDisplay (bool flag)

static bool	GetGlobalWarningDisplay ()

static double	GetGlobalDefaultCoordinateTolerance ()
	Access the global tolerance to determine congruent spaces.

static void	SetGlobalDefaultCoordinateTolerance (double)
	Access the global tolerance to determine congruent spaces.

static double	GetGlobalDefaultDirectionTolerance ()
	Access the global tolerance to determine congruent spaces.

static void	SetGlobalDefaultDirectionTolerance (double)
	Access the global tolerance to determine congruent spaces.

static bool	SetGlobalDefaultThreader (const std::string &threader)
	Set/Get the default threader used for process objects.

static std::string	GetGlobalDefaultThreader ()
	Set/Get the default threader used for process objects.

static void	SetGlobalDefaultNumberOfThreads (unsigned int n)

static unsigned int	GetGlobalDefaultNumberOfThreads ()
	Set/Get the default threader used for process objects.

Protected Member Functions inherited from itk::simple::ImageFilter
void	CheckImageMatchingDimension (const Image &image1, const Image &image2, const std::string &image2Name)

void	CheckImageMatchingPixelType (const Image &image1, const Image &image2, const std::string &image2Name)

void	CheckImageMatchingSize (const Image &image1, const Image &image2, const std::string &image2Name)

Protected Member Functions inherited from itk::simple::ProcessObject
virtual unsigned long	AddITKObserver (const itk::EventObject &, itk::Command *)

virtual itk::ProcessObject *	GetActiveProcess ()

virtual void	OnActiveProcessDelete ()

virtual void	onCommandDelete (const itk::simple::Command *cmd) noexcept

virtual void	PreUpdate (itk::ProcessObject *p)

virtual void	RemoveITKObserver (EventCommand &e)

Protected Member Functions inherited from itk::simple::NonCopyable
	NonCopyable ()=default

	NonCopyable (const NonCopyable &)=delete

NonCopyable &	operator= (const NonCopyable &)=delete

Static Protected Member Functions inherited from itk::simple::ImageFilter
template<class TImageType>
static void	FixNonZeroIndex (TImageType *img)

Static Protected Member Functions inherited from itk::simple::ProcessObject
template<class TImageType>
static TImageType::ConstPointer	CastImageToITK (const Image &img)

template<class TPixelType, unsigned int VImageDimension, unsigned int VLength, template< typename, unsigned int > class TVector>
static Image	CastITKToImage (itk::Image< TVector< TPixelType, VLength >, VImageDimension > *img)

template<unsigned int VImageDimension, unsigned int VLength, template< unsigned int > class TVector>
static Image	CastITKToImage (itk::Image< TVector< VLength >, VImageDimension > *img)

template<class TImageType>
static Image	CastITKToImage (TImageType *img)

static const itk::EventObject &	GetITKEventObject (EventEnum e)

template<typename T>
static std::ostream &	ToStringHelper (std::ostream &os, const T &v)

static std::ostream &	ToStringHelper (std::ostream &os, const char &v)

static std::ostream &	ToStringHelper (std::ostream &os, const signed char &v)

static std::ostream &	ToStringHelper (std::ostream &os, const unsigned char &v)

Member Typedef Documentation

◆ MemberFunctionType

using itk::simple::LabelIntensityStatisticsImageFilter::MemberFunctionType

private

Initial value:

 void (Self::*)(const Image *
    image, const Image *
    featureImage)

Setup for member function dispatching

Definition at line 437 of file sitkLabelIntensityStatisticsImageFilter.h.

◆ PixelIDTypeList

using itk::simple::LabelIntensityStatisticsImageFilter::PixelIDTypeList = IntegerLabelPixelIDTypeList

Define the pixels types supported by this filter

Definition at line 60 of file sitkLabelIntensityStatisticsImageFilter.h.

◆ Self

using itk::simple::LabelIntensityStatisticsImageFilter::Self = LabelIntensityStatisticsImageFilter

Definition at line 50 of file sitkLabelIntensityStatisticsImageFilter.h.

Constructor & Destructor Documentation

◆ ~LabelIntensityStatisticsImageFilter()

virtual itk::simple::LabelIntensityStatisticsImageFilter::~LabelIntensityStatisticsImageFilter ( )

virtual

Destructor

◆ LabelIntensityStatisticsImageFilter()

itk::simple::LabelIntensityStatisticsImageFilter::LabelIntensityStatisticsImageFilter ( )

Default Constructor that takes no arguments and initializes default parameters

Member Function Documentation

◆ ComputeFeretDiameterOff()

void itk::simple::LabelIntensityStatisticsImageFilter::ComputeFeretDiameterOff ( )

inline

Definition at line 90 of file sitkLabelIntensityStatisticsImageFilter.h.

References SetComputeFeretDiameter().

◆ ComputeFeretDiameterOn()

void itk::simple::LabelIntensityStatisticsImageFilter::ComputeFeretDiameterOn ( )

inline

Set the value of ComputeFeretDiameter to true or false respectfully.

Definition at line 88 of file sitkLabelIntensityStatisticsImageFilter.h.

References SetComputeFeretDiameter().

◆ ComputePerimeterOff()

void itk::simple::LabelIntensityStatisticsImageFilter::ComputePerimeterOff ( )

inline

Definition at line 111 of file sitkLabelIntensityStatisticsImageFilter.h.

References SetComputePerimeter().

◆ ComputePerimeterOn()

void itk::simple::LabelIntensityStatisticsImageFilter::ComputePerimeterOn ( )

inline

Set the value of ComputePerimeter to true or false respectfully.

Definition at line 109 of file sitkLabelIntensityStatisticsImageFilter.h.

References SetComputePerimeter().

◆ DualExecuteInternal()

template<class TImageType1, class TImageType2>

void itk::simple::LabelIntensityStatisticsImageFilter::DualExecuteInternal	(	const Image *	image,
		const Image *	featureImage )

private

◆ Execute()

void itk::simple::LabelIntensityStatisticsImageFilter::Execute	(	const Image &	image,
		const Image &	featureImage )

Execute the filter on the input image

◆ GetBackgroundValue()

double itk::simple::LabelIntensityStatisticsImageFilter::GetBackgroundValue ( ) const

inline

Set/Get the value used as "background" in the output image. Defaults to NumericTraits<PixelType>::NonpositiveMin() .

Definition at line 75 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_BackgroundValue.

◆ GetBoundingBox()

std::vector< unsigned int > itk::simple::LabelIntensityStatisticsImageFilter::GetBoundingBox ( int64_t label ) const

inline

Get the bounding box of a labeled object. The bounding box is returned following the common convention for returning an itk::ImageRegion as a 1 dimensional array containing the index values followed by the size values. For example, a 2D image region would have the array

\[[x, y, width, height]\]

.

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 142 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetBoundingBox.

◆ GetCenterOfGravity()

std::vector< double > itk::simple::LabelIntensityStatisticsImageFilter::GetCenterOfGravity ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 293 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetCenterOfGravity.

◆ GetCentroid()

std::vector< double > itk::simple::LabelIntensityStatisticsImageFilter::GetCentroid ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 158 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetCentroid.

◆ GetComputeFeretDiameter()

bool itk::simple::LabelIntensityStatisticsImageFilter::GetComputeFeretDiameter ( ) const

inline

Set/Get whether the maximum Feret diameter should be computed or not. The default value is false, because of the high computation time required.

Definition at line 96 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_ComputeFeretDiameter.

◆ GetComputePerimeter()

bool itk::simple::LabelIntensityStatisticsImageFilter::GetComputePerimeter ( ) const

inline

Set/Get whether the perimeter should be computed or not. The default value is false, because of the high computation time required.

Definition at line 117 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_ComputePerimeter.

◆ GetElongation()

double itk::simple::LabelIntensityStatisticsImageFilter::GetElongation ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 166 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetElongation.

◆ GetEquivalentEllipsoidDiameter()

std::vector< double > itk::simple::LabelIntensityStatisticsImageFilter::GetEquivalentEllipsoidDiameter ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 174 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetEquivalentEllipsoidDiameter.

◆ GetEquivalentSphericalPerimeter()

double itk::simple::LabelIntensityStatisticsImageFilter::GetEquivalentSphericalPerimeter ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 182 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetEquivalentSphericalPerimeter.

◆ GetEquivalentSphericalRadius()

double itk::simple::LabelIntensityStatisticsImageFilter::GetEquivalentSphericalRadius ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 190 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetEquivalentSphericalRadius.

◆ GetFeretDiameter()

double itk::simple::LabelIntensityStatisticsImageFilter::GetFeretDiameter ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 198 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetFeretDiameter.

◆ GetFlatness()

double itk::simple::LabelIntensityStatisticsImageFilter::GetFlatness ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 206 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetFlatness.

◆ GetKurtosis()

double itk::simple::LabelIntensityStatisticsImageFilter::GetKurtosis ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 301 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetKurtosis.

◆ GetLabels()

std::vector< int64_t > itk::simple::LabelIntensityStatisticsImageFilter::GetLabels ( ) const

inline

This is a measurement. Its value is updated in the Execute methods, so the value will only be valid after an execution.

Definition at line 213 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_Labels.

◆ GetMaximum()

double itk::simple::LabelIntensityStatisticsImageFilter::GetMaximum ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 309 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetMaximum.

◆ GetMaximumIndex()

std::vector< uint32_t > itk::simple::LabelIntensityStatisticsImageFilter::GetMaximumIndex ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 317 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetMaximumIndex.

◆ GetMean()

double itk::simple::LabelIntensityStatisticsImageFilter::GetMean ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 325 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetMean.

◆ GetMedian()

double itk::simple::LabelIntensityStatisticsImageFilter::GetMedian ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 333 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetMedian.

◆ GetMemberFunctionFactory()

static const detail::DualMemberFunctionFactory< MemberFunctionType > & itk::simple::LabelIntensityStatisticsImageFilter::GetMemberFunctionFactory ( )

staticprivate

◆ GetMinimum()

double itk::simple::LabelIntensityStatisticsImageFilter::GetMinimum ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 341 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetMinimum.

◆ GetMinimumIndex()

std::vector< uint32_t > itk::simple::LabelIntensityStatisticsImageFilter::GetMinimumIndex ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 349 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetMinimumIndex.

◆ GetName()

std::string itk::simple::LabelIntensityStatisticsImageFilter::GetName ( ) const

inlinevirtual

Name of this class

Implements itk::simple::ProcessObject.

Definition at line 416 of file sitkLabelIntensityStatisticsImageFilter.h.

◆ GetNumberOfBins()

uint32_t itk::simple::LabelIntensityStatisticsImageFilter::GetNumberOfBins ( ) const

inline

Set/Get the number of bins in the histogram. Note that the histogram is used to compute the median value, and that this option may have an effect on the value of the median.

Definition at line 132 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_NumberOfBins.

◆ GetNumberOfLabels()

uint64_t itk::simple::LabelIntensityStatisticsImageFilter::GetNumberOfLabels ( )

Return the number of labels after execution.

Referenced by detail::DualExecuteInternalAddressor< MemberFunctionType >.

◆ GetNumberOfPixels()

uint64_t itk::simple::LabelIntensityStatisticsImageFilter::GetNumberOfPixels ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 221 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetNumberOfPixels.

◆ GetNumberOfPixelsOnBorder()

uint64_t itk::simple::LabelIntensityStatisticsImageFilter::GetNumberOfPixelsOnBorder ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 229 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetNumberOfPixelsOnBorder.

◆ GetPerimeter()

double itk::simple::LabelIntensityStatisticsImageFilter::GetPerimeter ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 237 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetPerimeter.

◆ GetPerimeterOnBorder()

double itk::simple::LabelIntensityStatisticsImageFilter::GetPerimeterOnBorder ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 245 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetPerimeterOnBorder.

◆ GetPerimeterOnBorderRatio()

double itk::simple::LabelIntensityStatisticsImageFilter::GetPerimeterOnBorderRatio ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 253 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetPerimeterOnBorderRatio.

◆ GetPhysicalSize()

double itk::simple::LabelIntensityStatisticsImageFilter::GetPhysicalSize ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 261 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetPhysicalSize.

◆ GetPrincipalAxes()

std::vector< double > itk::simple::LabelIntensityStatisticsImageFilter::GetPrincipalAxes ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 269 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetPrincipalAxes.

◆ GetPrincipalMoments()

std::vector< double > itk::simple::LabelIntensityStatisticsImageFilter::GetPrincipalMoments ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 277 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetPrincipalMoments.

◆ GetRegion()

std::vector< unsigned int > itk::simple::LabelIntensityStatisticsImageFilter::GetRegion ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 150 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetRegion.

◆ GetRoundness()

double itk::simple::LabelIntensityStatisticsImageFilter::GetRoundness ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 285 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetRoundness.

◆ GetSkewness()

double itk::simple::LabelIntensityStatisticsImageFilter::GetSkewness ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 357 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetSkewness.

◆ GetStandardDeviation()

double itk::simple::LabelIntensityStatisticsImageFilter::GetStandardDeviation ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 365 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetStandardDeviation.

◆ GetSum()

double itk::simple::LabelIntensityStatisticsImageFilter::GetSum ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 373 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetSum.

◆ GetVariance()

double itk::simple::LabelIntensityStatisticsImageFilter::GetVariance ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 381 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetVariance.

◆ GetWeightedElongation()

double itk::simple::LabelIntensityStatisticsImageFilter::GetWeightedElongation ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 389 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetWeightedElongation.

◆ GetWeightedFlatness()

double itk::simple::LabelIntensityStatisticsImageFilter::GetWeightedFlatness ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 397 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetWeightedFlatness.

◆ GetWeightedPrincipalAxes()

std::vector< double > itk::simple::LabelIntensityStatisticsImageFilter::GetWeightedPrincipalAxes ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 405 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetWeightedPrincipalAxes.

◆ GetWeightedPrincipalMoments()

std::vector< double > itk::simple::LabelIntensityStatisticsImageFilter::GetWeightedPrincipalMoments ( int64_t label ) const

inline

This is an active measurement. It may be accessed while the filter is being executing in command call-backs and can be accessed after execution.

Definition at line 413 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_pfGetWeightedPrincipalMoments.

◆ HasLabel()

bool itk::simple::LabelIntensityStatisticsImageFilter::HasLabel ( int64_t label )

Does the specified label exist? Can only be called after a call a call to Update().

◆ SetBackgroundValue()

void itk::simple::LabelIntensityStatisticsImageFilter::SetBackgroundValue ( double BackgroundValue )

inline

Set/Get the value used as "background" in the output image. Defaults to NumericTraits<PixelType>::NonpositiveMin() .

Definition at line 69 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_BackgroundValue.

◆ SetComputeFeretDiameter()

void itk::simple::LabelIntensityStatisticsImageFilter::SetComputeFeretDiameter ( bool ComputeFeretDiameter )

inline

Set/Get whether the maximum Feret diameter should be computed or not. The default value is false, because of the high computation time required.

Definition at line 83 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_ComputeFeretDiameter.

Referenced by ComputeFeretDiameterOff(), and ComputeFeretDiameterOn().

◆ SetComputePerimeter()

void itk::simple::LabelIntensityStatisticsImageFilter::SetComputePerimeter ( bool ComputePerimeter )

inline

Set/Get whether the perimeter should be computed or not. The default value is false, because of the high computation time required.

Definition at line 104 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_ComputePerimeter.

Referenced by ComputePerimeterOff(), and ComputePerimeterOn().

◆ SetNumberOfBins()

void itk::simple::LabelIntensityStatisticsImageFilter::SetNumberOfBins ( uint32_t NumberOfBins )

inline

Set/Get the number of bins in the histogram. Note that the histogram is used to compute the median value, and that this option may have an effect on the value of the median.

Definition at line 125 of file sitkLabelIntensityStatisticsImageFilter.h.

References m_NumberOfBins.

◆ ToString()

std::string itk::simple::LabelIntensityStatisticsImageFilter::ToString ( ) const

virtual

Print ourselves out

Reimplemented from itk::simple::ProcessObject.

Friends And Related Symbol Documentation

◆ detail::DualExecuteInternalAddressor< MemberFunctionType >

friend struct detail::DualExecuteInternalAddressor< MemberFunctionType >

friend

Definition at line 430 of file sitkLabelIntensityStatisticsImageFilter.h.

References GetNumberOfLabels().

Member Data Documentation

◆ m_BackgroundValue

double itk::simple::LabelIntensityStatisticsImageFilter::m_BackgroundValue { 0 }

private

Definition at line 451 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetBackgroundValue(), and SetBackgroundValue().

◆ m_ComputeFeretDiameter

bool itk::simple::LabelIntensityStatisticsImageFilter::m_ComputeFeretDiameter { false }

private

Definition at line 453 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetComputeFeretDiameter(), and SetComputeFeretDiameter().

◆ m_ComputePerimeter

bool itk::simple::LabelIntensityStatisticsImageFilter::m_ComputePerimeter { true }

private

Definition at line 455 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetComputePerimeter(), and SetComputePerimeter().

◆ m_Filter

std::unique_ptr<itk::ProcessObject, ProcessObjectDeleter> itk::simple::LabelIntensityStatisticsImageFilter::m_Filter {nullptr}

private

Definition at line 499 of file sitkLabelIntensityStatisticsImageFilter.h.

◆ m_Labels

std::vector<int64_t> itk::simple::LabelIntensityStatisticsImageFilter::m_Labels { std::vector<int64_t>() }

private

Definition at line 470 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetLabels().

◆ m_NumberOfBins

uint32_t itk::simple::LabelIntensityStatisticsImageFilter::m_NumberOfBins { 128u }

private

Definition at line 457 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetNumberOfBins(), and SetNumberOfBins().

◆ m_pfGetBoundingBox

std::function<std::vector<unsigned int>(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetBoundingBox

private

Definition at line 461 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetBoundingBox().

◆ m_pfGetCenterOfGravity

std::function<std::vector<double>(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetCenterOfGravity

private

Definition at line 480 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetCenterOfGravity().

◆ m_pfGetCentroid

std::function<std::vector<double>(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetCentroid

private

Definition at line 463 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetCentroid().

◆ m_pfGetElongation

std::function<double(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetElongation

private

Definition at line 464 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetElongation().

◆ m_pfGetEquivalentEllipsoidDiameter

std::function<std::vector<double>(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetEquivalentEllipsoidDiameter

private

Definition at line 465 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetEquivalentEllipsoidDiameter().

◆ m_pfGetEquivalentSphericalPerimeter

std::function<double(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetEquivalentSphericalPerimeter

private

Definition at line 466 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetEquivalentSphericalPerimeter().

◆ m_pfGetEquivalentSphericalRadius

std::function<double(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetEquivalentSphericalRadius

private

Definition at line 467 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetEquivalentSphericalRadius().

◆ m_pfGetFeretDiameter

std::function<double(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetFeretDiameter

private

Definition at line 468 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetFeretDiameter().

◆ m_pfGetFlatness

std::function<double(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetFlatness

private

Definition at line 469 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetFlatness().

◆ m_pfGetKurtosis

std::function<double(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetKurtosis

private

Definition at line 481 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetKurtosis().

◆ m_pfGetMaximum

std::function<double(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetMaximum

private

Definition at line 482 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetMaximum().

◆ m_pfGetMaximumIndex

std::function<std::vector<uint32_t>(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetMaximumIndex

private

Definition at line 483 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetMaximumIndex().

◆ m_pfGetMean

std::function<double(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetMean

private

Definition at line 484 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetMean().

◆ m_pfGetMedian

std::function<double(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetMedian

private

Definition at line 485 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetMedian().

◆ m_pfGetMinimum

std::function<double(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetMinimum

private

Definition at line 486 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetMinimum().

◆ m_pfGetMinimumIndex

std::function<std::vector<uint32_t>(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetMinimumIndex

private

Definition at line 487 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetMinimumIndex().

◆ m_pfGetNumberOfPixels

std::function<uint64_t(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetNumberOfPixels

private

Definition at line 471 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetNumberOfPixels().

◆ m_pfGetNumberOfPixelsOnBorder

std::function<uint64_t(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetNumberOfPixelsOnBorder

private

Definition at line 472 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetNumberOfPixelsOnBorder().

◆ m_pfGetPerimeter

std::function<double(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetPerimeter

private

Definition at line 473 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetPerimeter().

◆ m_pfGetPerimeterOnBorder

std::function<double(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetPerimeterOnBorder

private

Definition at line 474 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetPerimeterOnBorder().

◆ m_pfGetPerimeterOnBorderRatio

std::function<double(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetPerimeterOnBorderRatio

private

Definition at line 475 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetPerimeterOnBorderRatio().

◆ m_pfGetPhysicalSize

std::function<double(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetPhysicalSize

private

Definition at line 476 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetPhysicalSize().

◆ m_pfGetPrincipalAxes

std::function<std::vector<double>(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetPrincipalAxes

private

Definition at line 477 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetPrincipalAxes().

◆ m_pfGetPrincipalMoments

std::function<std::vector<double>(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetPrincipalMoments

private

Definition at line 478 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetPrincipalMoments().

◆ m_pfGetRegion

std::function<std::vector<unsigned int>(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetRegion

private

Definition at line 462 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetRegion().

◆ m_pfGetRoundness

std::function<double(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetRoundness

private

Definition at line 479 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetRoundness().

◆ m_pfGetSkewness

std::function<double(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetSkewness

private

Definition at line 488 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetSkewness().

◆ m_pfGetStandardDeviation

std::function<double(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetStandardDeviation

private

Definition at line 489 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetStandardDeviation().

◆ m_pfGetSum

std::function<double(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetSum

private

Definition at line 490 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetSum().

◆ m_pfGetVariance

std::function<double(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetVariance

private

Definition at line 491 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetVariance().

◆ m_pfGetWeightedElongation

std::function<double(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetWeightedElongation

private

Definition at line 492 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetWeightedElongation().

◆ m_pfGetWeightedFlatness

std::function<double(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetWeightedFlatness

private

Definition at line 493 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetWeightedFlatness().

◆ m_pfGetWeightedPrincipalAxes

std::function<std::vector<double>(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetWeightedPrincipalAxes

private

Definition at line 494 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetWeightedPrincipalAxes().

◆ m_pfGetWeightedPrincipalMoments

std::function<std::vector<double>(int64_t)> itk::simple::LabelIntensityStatisticsImageFilter::m_pfGetWeightedPrincipalMoments

private

Definition at line 495 of file sitkLabelIntensityStatisticsImageFilter.h.

Referenced by GetWeightedPrincipalMoments().

The documentation for this class was generated from the following file:

sitkLabelIntensityStatisticsImageFilter.h

Detailed Description

Public Types

Public Member Functions

Private Types

Private Member Functions

Static Private Member Functions

Private Attributes

Friends

Additional Inherited Members

Member Typedef Documentation

◆ MemberFunctionType

◆ PixelIDTypeList

◆ Self

Constructor & Destructor Documentation

◆ ~LabelIntensityStatisticsImageFilter()

◆ LabelIntensityStatisticsImageFilter()

Member Function Documentation

◆ ComputeFeretDiameterOff()

◆ ComputeFeretDiameterOn()

◆ ComputePerimeterOff()

◆ ComputePerimeterOn()

◆ DualExecuteInternal()

◆ Execute()

◆ GetBackgroundValue()

◆ GetBoundingBox()

◆ GetCenterOfGravity()

◆ GetCentroid()

◆ GetComputeFeretDiameter()

◆ GetComputePerimeter()

◆ GetElongation()

◆ GetEquivalentEllipsoidDiameter()

◆ GetEquivalentSphericalPerimeter()

◆ GetEquivalentSphericalRadius()

◆ GetFeretDiameter()

◆ GetFlatness()

◆ GetKurtosis()

◆ GetLabels()

◆ GetMaximum()

◆ GetMaximumIndex()

◆ GetMean()

◆ GetMedian()

◆ GetMemberFunctionFactory()

◆ GetMinimum()

◆ GetMinimumIndex()

◆ GetName()

◆ GetNumberOfBins()

◆ GetNumberOfLabels()

◆ GetNumberOfPixels()

◆ GetNumberOfPixelsOnBorder()

◆ GetPerimeter()

◆ GetPerimeterOnBorder()

◆ GetPerimeterOnBorderRatio()

◆ GetPhysicalSize()

◆ GetPrincipalAxes()

◆ GetPrincipalMoments()

◆ GetRegion()

◆ GetRoundness()

◆ GetSkewness()

◆ GetStandardDeviation()

◆ GetSum()

◆ GetVariance()

◆ GetWeightedElongation()

◆ GetWeightedFlatness()

◆ GetWeightedPrincipalAxes()

◆ GetWeightedPrincipalMoments()

◆ HasLabel()

◆ SetBackgroundValue()

◆ SetComputeFeretDiameter()

◆ SetComputePerimeter()

◆ SetNumberOfBins()

◆ ToString()

Friends And Related Symbol Documentation

◆ detail::DualExecuteInternalAddressor< MemberFunctionType >

Member Data Documentation

◆ m_BackgroundValue

◆ m_ComputeFeretDiameter

◆ m_ComputePerimeter

◆ m_Filter

◆ m_Labels

◆ m_NumberOfBins