SimpleITK  2.1.0.dev86
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itk::simple::ClosingByReconstructionImageFilter Class Reference

Closing by reconstruction of an image. More...

#include <sitkClosingByReconstructionImageFilter.h>

+ Inheritance diagram for itk::simple::ClosingByReconstructionImageFilter:
+ Collaboration diagram for itk::simple::ClosingByReconstructionImageFilter:

Public Types

using PixelIDTypeList = BasicPixelIDTypeList
 
using Self = ClosingByReconstructionImageFilter
 
- Public Types inherited from itk::simple::ImageFilter
using Self = ImageFilter
 
- Public Types inherited from itk::simple::ProcessObject
using Self = ProcessObject
 

Public Member Functions

 ClosingByReconstructionImageFilter ()
 
Image Execute (const Image &image1)
 
SelfFullyConnectedOff ()
 
SelfFullyConnectedOn ()
 
bool GetFullyConnected () const
 
std::vector< unsigned int > GetKernelRadius () const
 
KernelEnum GetKernelType () const
 
std::string GetName () const
 
bool GetPreserveIntensities () const
 
SelfPreserveIntensitiesOff ()
 
SelfPreserveIntensitiesOn ()
 
SelfSetFullyConnected (bool FullyConnected)
 
SelfSetKernelRadius (std::vector< unsigned int > KernelRadius)
 
SelfSetKernelRadius (unsigned int value)
 
SelfSetKernelType (KernelEnum KernelType)
 
SelfSetPreserveIntensities (bool PreserveIntensities)
 
std::string ToString () const
 
virtual ~ClosingByReconstructionImageFilter ()
 
- Public Member Functions inherited from itk::simple::ImageFilter
 ImageFilter ()
 
virtual ~ImageFilter ()=0
 
- Public Member Functions inherited from itk::simple::ProcessObject
virtual void Abort ()
 
virtual int AddCommand (itk::simple::EventEnum event, const std::function< void()> &func)
 Directly add a callback to observe an event. More...
 
virtual int AddCommand (itk::simple::EventEnum event, itk::simple::Command &cmd)
 Add a Command Object to observer the event. More...
 
virtual float GetProgress () const
 An Active Measurement of the progress of execution. More...
 
virtual bool HasCommand (itk::simple::EventEnum event) const
 Query of this object has any registered commands for event. More...
 
 ProcessObject ()
 
virtual void RemoveAllCommands ()
 Remove all registered commands. More...
 
virtual ~ProcessObject ()
 
virtual void DebugOn ()
 
virtual void DebugOff ()
 
virtual bool GetDebug () const
 
virtual void SetDebug (bool debugFlag)
 
virtual void SetNumberOfThreads (unsigned int n)
 
virtual unsigned int GetNumberOfThreads () const
 
virtual void SetNumberOfWorkUnits (unsigned int n)
 
virtual unsigned int GetNumberOfWorkUnits () const
 

Private Types

using MemberFunctionType = Image(Self::*)(const Image &image1)
 

Private Member Functions

template<class TImageType >
Image ExecuteInternal (const Image &image1)
 

Private Attributes

bool m_FullyConnected {false}
 
std::vector< unsigned int > m_KernelRadius {std::vector<uint32_t>(3, 1)}
 
KernelEnum m_KernelType {itk::simple::sitkBall}
 
std::unique_ptr< detail::MemberFunctionFactory< MemberFunctionType > > m_MemberFactory
 
bool m_PreserveIntensities {false}
 

Friends

struct detail::MemberFunctionAddressor< MemberFunctionType >
 

Additional Inherited Members

- Static Public Member Functions inherited from itk::simple::ProcessObject
static bool GetGlobalDefaultDebug ()
 
static void GlobalDefaultDebugOff ()
 
static void GlobalDefaultDebugOn ()
 
static void SetGlobalDefaultDebug (bool debugFlag)
 
static void GlobalWarningDisplayOn ()
 
static void GlobalWarningDisplayOff ()
 
static void SetGlobalWarningDisplay (bool flag)
 
static bool GetGlobalWarningDisplay ()
 
static double GetGlobalDefaultCoordinateTolerance ()
 Access the global tolerance to determine congruent spaces. More...
 
static void SetGlobalDefaultCoordinateTolerance (double)
 Access the global tolerance to determine congruent spaces. More...
 
static double GetGlobalDefaultDirectionTolerance ()
 Access the global tolerance to determine congruent spaces. More...
 
static void SetGlobalDefaultDirectionTolerance (double)
 Access the global tolerance to determine congruent spaces. More...
 
static bool SetGlobalDefaultThreader (const std::string &threader)
 Set/Get the default threader used for process objects. More...
 
static std::string GetGlobalDefaultThreader ()
 Set/Get the default threader used for process objects. More...
 
static void SetGlobalDefaultNumberOfThreads (unsigned int n)
 
static unsigned int GetGlobalDefaultNumberOfThreads ()
 Set/Get the default threader used for process objects. More...
 
- Protected Member Functions inherited from itk::simple::ImageFilter
void CheckImageMatchingDimension (const Image &image1, const Image &image2, const std::string &image2Name)
 
void CheckImageMatchingPixelType (const Image &image1, const Image &image2, const std::string &image2Name)
 
void CheckImageMatchingSize (const Image &image1, const Image &image2, const std::string &image2Name)
 
- Protected Member Functions inherited from itk::simple::ProcessObject
virtual unsigned long AddITKObserver (const itk::EventObject &, itk::Command *)
 
virtual itk::ProcessObjectGetActiveProcess ()
 
virtual void OnActiveProcessDelete ()
 
virtual void onCommandDelete (const itk::simple::Command *cmd) noexcept
 
virtual void PreUpdate (itk::ProcessObject *p)
 
virtual void RemoveITKObserver (EventCommand &e)
 
- Protected Member Functions inherited from itk::simple::NonCopyable
 NonCopyable ()=default
 
 NonCopyable (const NonCopyable &)=delete
 
NonCopyableoperator= (const NonCopyable &)=delete
 
- Static Protected Member Functions inherited from itk::simple::ImageFilter
template<class TImageType >
static void FixNonZeroIndex (TImageType *img)
 
- Static Protected Member Functions inherited from itk::simple::ProcessObject
template<class TImageType >
static TImageType::ConstPointer CastImageToITK (const Image &img)
 
template<class TPixelType , unsigned int VImageDimension, unsigned int VLength, template< typename, unsigned int > class TVector>
static Image CastITKToImage (itk::Image< TVector< TPixelType, VLength >, VImageDimension > *img)
 
template<class TImageType >
static Image CastITKToImage (TImageType *img)
 
static const itk::EventObjectGetITKEventObject (EventEnum e)
 
template<typename T >
static std::ostream & ToStringHelper (std::ostream &os, const T &v)
 
static std::ostream & ToStringHelper (std::ostream &os, const char &v)
 
static std::ostream & ToStringHelper (std::ostream &os, const signed char &v)
 
static std::ostream & ToStringHelper (std::ostream &os, const unsigned char &v)
 

Detailed Description

Closing by reconstruction of an image.

This filter is similar to the morphological closing, but contrary to the morphological closing, the closing by reconstruction preserves the shape of the components. The closing by reconstruction of an image "f" is defined as:

ClosingByReconstruction(f) = ErosionByReconstruction(f, Dilation(f)).

Closing by reconstruction not only preserves structures preserved by the dilation, but also levels raises the contrast of the darkest regions. If PreserveIntensities is on, a subsequent reconstruction by dilation using a marker image that is the original image for all unaffected pixels.

Closing by reconstruction is described in Chapter 6.3.9 of Pierre Soille's book "Morphological Image Analysis: Principles and Applications", Second Edition, Springer, 2003.

Author
Gaetan Lehmann. Biologie du Developpement et de la Reproduction, INRA de Jouy-en-Josas, France.
See also
GrayscaleMorphologicalClosingImageFilter
itk::simple::ClosingByReconstruction for the procedural interface
itk::ClosingByReconstructionImageFilter for the Doxygen on the original ITK class.

Definition at line 54 of file sitkClosingByReconstructionImageFilter.h.

Member Typedef Documentation

◆ MemberFunctionType

Setup for member function dispatching

Definition at line 135 of file sitkClosingByReconstructionImageFilter.h.

◆ PixelIDTypeList

Define the pixels types supported by this filter

Definition at line 66 of file sitkClosingByReconstructionImageFilter.h.

◆ Self

Definition at line 56 of file sitkClosingByReconstructionImageFilter.h.

Constructor & Destructor Documentation

◆ ~ClosingByReconstructionImageFilter()

virtual itk::simple::ClosingByReconstructionImageFilter::~ClosingByReconstructionImageFilter ( )
virtual

Destructor

◆ ClosingByReconstructionImageFilter()

itk::simple::ClosingByReconstructionImageFilter::ClosingByReconstructionImageFilter ( )

Default Constructor that takes no arguments and initializes default parameters

Member Function Documentation

◆ Execute()

Image itk::simple::ClosingByReconstructionImageFilter::Execute ( const Image image1)

Execute the filter on the input image

◆ ExecuteInternal()

template<class TImageType >
Image itk::simple::ClosingByReconstructionImageFilter::ExecuteInternal ( const Image image1)
private

◆ FullyConnectedOff()

Self& itk::simple::ClosingByReconstructionImageFilter::FullyConnectedOff ( )
inline

Definition at line 99 of file sitkClosingByReconstructionImageFilter.h.

◆ FullyConnectedOn()

Self& itk::simple::ClosingByReconstructionImageFilter::FullyConnectedOn ( )
inline

Set the value of FullyConnected to true or false respectfully.

Definition at line 98 of file sitkClosingByReconstructionImageFilter.h.

◆ GetFullyConnected()

bool itk::simple::ClosingByReconstructionImageFilter::GetFullyConnected ( ) const
inline

Set/Get whether the connected components are defined strictly by face connectivity or by face+edge+vertex connectivity. Default is FullyConnectedOff. For objects that are 1 pixel wide, use FullyConnectedOn.

Definition at line 104 of file sitkClosingByReconstructionImageFilter.h.

◆ GetKernelRadius()

std::vector<unsigned int> itk::simple::ClosingByReconstructionImageFilter::GetKernelRadius ( ) const
inline

Get the radius of the kernel structuring element.

Definition at line 80 of file sitkClosingByReconstructionImageFilter.h.

◆ GetKernelType()

KernelEnum itk::simple::ClosingByReconstructionImageFilter::GetKernelType ( ) const
inline

Get the kernel or structuring element used for the morphology.

Definition at line 90 of file sitkClosingByReconstructionImageFilter.h.

◆ GetName()

std::string itk::simple::ClosingByReconstructionImageFilter::GetName ( ) const
inlinevirtual

Name of this class

Implements itk::simple::ProcessObject.

Definition at line 121 of file sitkClosingByReconstructionImageFilter.h.

◆ GetPreserveIntensities()

bool itk::simple::ClosingByReconstructionImageFilter::GetPreserveIntensities ( ) const
inline

Set/Get whether the original intensities of the image retained for those pixels unaffected by the opening by reconstrcution. If Off, the output pixel contrast will be reduced.

Definition at line 118 of file sitkClosingByReconstructionImageFilter.h.

◆ PreserveIntensitiesOff()

Self& itk::simple::ClosingByReconstructionImageFilter::PreserveIntensitiesOff ( )
inline

Definition at line 113 of file sitkClosingByReconstructionImageFilter.h.

◆ PreserveIntensitiesOn()

Self& itk::simple::ClosingByReconstructionImageFilter::PreserveIntensitiesOn ( )
inline

Set the value of PreserveIntensities to true or false respectfully.

Definition at line 112 of file sitkClosingByReconstructionImageFilter.h.

◆ SetFullyConnected()

Self& itk::simple::ClosingByReconstructionImageFilter::SetFullyConnected ( bool  FullyConnected)
inline

Set/Get whether the connected components are defined strictly by face connectivity or by face+edge+vertex connectivity. Default is FullyConnectedOff. For objects that are 1 pixel wide, use FullyConnectedOn.

Definition at line 95 of file sitkClosingByReconstructionImageFilter.h.

◆ SetKernelRadius() [1/2]

Self& itk::simple::ClosingByReconstructionImageFilter::SetKernelRadius ( std::vector< unsigned int >  KernelRadius)
inline

Set the radius of the kernel structuring element.

Definition at line 72 of file sitkClosingByReconstructionImageFilter.h.

◆ SetKernelRadius() [2/2]

Self& itk::simple::ClosingByReconstructionImageFilter::SetKernelRadius ( unsigned int  value)
inline

Set the values of the KernelRadius vector all to value

Definition at line 75 of file sitkClosingByReconstructionImageFilter.h.

◆ SetKernelType()

Self& itk::simple::ClosingByReconstructionImageFilter::SetKernelType ( KernelEnum  KernelType)
inline

Set the kernel or structuring element used for the morphology.

Definition at line 85 of file sitkClosingByReconstructionImageFilter.h.

◆ SetPreserveIntensities()

Self& itk::simple::ClosingByReconstructionImageFilter::SetPreserveIntensities ( bool  PreserveIntensities)
inline

Set/Get whether the original intensities of the image retained for those pixels unaffected by the opening by reconstrcution. If Off, the output pixel contrast will be reduced.

Definition at line 109 of file sitkClosingByReconstructionImageFilter.h.

◆ ToString()

std::string itk::simple::ClosingByReconstructionImageFilter::ToString ( ) const
virtual

Print ourselves out

Reimplemented from itk::simple::ProcessObject.

Friends And Related Function Documentation

◆ detail::MemberFunctionAddressor< MemberFunctionType >

Definition at line 139 of file sitkClosingByReconstructionImageFilter.h.

Member Data Documentation

◆ m_FullyConnected

bool itk::simple::ClosingByReconstructionImageFilter::m_FullyConnected {false}
private

Definition at line 150 of file sitkClosingByReconstructionImageFilter.h.

◆ m_KernelRadius

std::vector<unsigned int> itk::simple::ClosingByReconstructionImageFilter::m_KernelRadius {std::vector<uint32_t>(3, 1)}
private

Definition at line 145 of file sitkClosingByReconstructionImageFilter.h.

◆ m_KernelType

KernelEnum itk::simple::ClosingByReconstructionImageFilter::m_KernelType {itk::simple::sitkBall}
private

Definition at line 147 of file sitkClosingByReconstructionImageFilter.h.

◆ m_MemberFactory

std::unique_ptr<detail::MemberFunctionFactory<MemberFunctionType> > itk::simple::ClosingByReconstructionImageFilter::m_MemberFactory
private

Definition at line 141 of file sitkClosingByReconstructionImageFilter.h.

◆ m_PreserveIntensities

bool itk::simple::ClosingByReconstructionImageFilter::m_PreserveIntensities {false}
private

Definition at line 153 of file sitkClosingByReconstructionImageFilter.h.


The documentation for this class was generated from the following file: