binary reconstruction by erosion of an image More...

#include <sitkBinaryReconstructionByErosionImageFilter.h>

Inheritance diagram for itk::simple::BinaryReconstructionByErosionImageFilter:

Collaboration diagram for itk::simple::BinaryReconstructionByErosionImageFilter:

Detailed Description

binary reconstruction by erosion of an image

Reconstruction by erosion operates on a "marker" image and a "mask" image, and is defined as the erosion of the marker image with respect to the mask image iterated until stability.

Geodesic morphology is described in Chapter 6.2 of Pierre Soille's book "Morphological Image Analysis: Principles and Applications", Second Edition, Springer, 2003.

Author: Gaetan Lehmann. Biologie du Developpement et de la Reproduction, INRA de Jouy-en-Josas, France.

This implementation was taken from the Insight Journal paper: https://doi.org/10.54294/q6auw4

See also: MorphologyImageFilter , ReconstructionByErosionImageFilter , BinaryReconstructionByDilationImageFilter; itk::simple::BinaryReconstructionByErosion for the procedural interface; itk::BinaryReconstructionByErosionImageFilter for the Doxygen on the original ITK class.

Definition at line 54 of file sitkBinaryReconstructionByErosionImageFilter.h.

Public Types
using	PixelIDTypeList = IntegerPixelIDTypeList

using	Self = BinaryReconstructionByErosionImageFilter

Public Types inherited from itk::simple::ImageFilter
using	Self = ImageFilter

Public Types inherited from itk::simple::ProcessObject
using	Self = ProcessObject

Public Member Functions
	BinaryReconstructionByErosionImageFilter ()

Image	Execute (const Image &markerImage, const Image &maskImage)

void	FullyConnectedOff ()

void	FullyConnectedOn ()

double	GetBackgroundValue () const

double	GetForegroundValue () const

bool	GetFullyConnected () const

std::string	GetName () const

void	SetBackgroundValue (double BackgroundValue)

void	SetForegroundValue (double ForegroundValue)

void	SetFullyConnected (bool FullyConnected)

std::string	ToString () const

virtual	~BinaryReconstructionByErosionImageFilter ()

Public Member Functions inherited from itk::simple::ImageFilter
	ImageFilter ()

virtual	~ImageFilter ()=0

Public Member Functions inherited from itk::simple::ProcessObject
virtual void	Abort ()

virtual int	AddCommand (itk::simple::EventEnum event, const std::function< void()> &func)
	Directly add a callback to observe an event.

virtual int	AddCommand (itk::simple::EventEnum event, itk::simple::Command &cmd)
	Add a Command Object to observer the event.

virtual float	GetProgress () const
	An Active Measurement of the progress of execution.

virtual bool	HasCommand (itk::simple::EventEnum event) const
	Query of this object has any registered commands for event.

	ProcessObject ()

virtual void	RemoveAllCommands ()
	Remove all registered commands.

virtual	~ProcessObject ()

virtual void	DebugOn ()

virtual void	DebugOff ()

virtual bool	GetDebug () const

virtual void	SetDebug (bool debugFlag)

virtual void	SetNumberOfThreads (unsigned int n)

virtual unsigned int	GetNumberOfThreads () const

virtual void	SetNumberOfWorkUnits (unsigned int n)

virtual unsigned int	GetNumberOfWorkUnits () const

Private Types
using	MemberFunctionType

Private Member Functions
template<class TImageType>
Image	ExecuteInternal (const Image markerImage, const Image maskImage)

Static Private Member Functions
static const detail::MemberFunctionFactory< MemberFunctionType > &	GetMemberFunctionFactory ()

Private Attributes
double	m_BackgroundValue { 0.0 }

double	m_ForegroundValue { 1.0 }

bool	m_FullyConnected { false }

Friends
struct	detail::MemberFunctionAddressor< MemberFunctionType >

Additional Inherited Members
Static Public Member Functions inherited from itk::simple::ProcessObject
static bool	GetGlobalDefaultDebug ()

static void	GlobalDefaultDebugOff ()

static void	GlobalDefaultDebugOn ()

static void	SetGlobalDefaultDebug (bool debugFlag)

static void	GlobalWarningDisplayOn ()

static void	GlobalWarningDisplayOff ()

static void	SetGlobalWarningDisplay (bool flag)

static bool	GetGlobalWarningDisplay ()

static double	GetGlobalDefaultCoordinateTolerance ()
	Access the global tolerance to determine congruent spaces.

static void	SetGlobalDefaultCoordinateTolerance (double)
	Access the global tolerance to determine congruent spaces.

static double	GetGlobalDefaultDirectionTolerance ()
	Access the global tolerance to determine congruent spaces.

static void	SetGlobalDefaultDirectionTolerance (double)
	Access the global tolerance to determine congruent spaces.

static bool	SetGlobalDefaultThreader (const std::string &threader)
	Set/Get the default threader used for process objects.

static std::string	GetGlobalDefaultThreader ()
	Set/Get the default threader used for process objects.

static void	SetGlobalDefaultNumberOfThreads (unsigned int n)

static unsigned int	GetGlobalDefaultNumberOfThreads ()
	Set/Get the default threader used for process objects.

Protected Member Functions inherited from itk::simple::ImageFilter
void	CheckImageMatchingDimension (const Image &image1, const Image &image2, const std::string &image2Name)

void	CheckImageMatchingPixelType (const Image &image1, const Image &image2, const std::string &image2Name)

void	CheckImageMatchingSize (const Image &image1, const Image &image2, const std::string &image2Name)

Protected Member Functions inherited from itk::simple::ProcessObject
virtual unsigned long	AddITKObserver (const itk::EventObject &, itk::Command *)

virtual itk::ProcessObject *	GetActiveProcess ()

virtual void	OnActiveProcessDelete ()

virtual void	onCommandDelete (const itk::simple::Command *cmd) noexcept

virtual void	PreUpdate (itk::ProcessObject *p)

virtual void	RemoveITKObserver (EventCommand &e)

Protected Member Functions inherited from itk::simple::NonCopyable
	NonCopyable ()=default

	NonCopyable (const NonCopyable &)=delete

NonCopyable &	operator= (const NonCopyable &)=delete

Static Protected Member Functions inherited from itk::simple::ImageFilter
template<class TImageType>
static void	FixNonZeroIndex (TImageType *img)

Static Protected Member Functions inherited from itk::simple::ProcessObject
template<class TImageType>
static TImageType::ConstPointer	CastImageToITK (const Image &img)

template<class TPixelType, unsigned int VImageDimension, unsigned int VLength, template< typename, unsigned int > class TVector>
static Image	CastITKToImage (itk::Image< TVector< TPixelType, VLength >, VImageDimension > *img)

template<unsigned int VImageDimension, unsigned int VLength, template< unsigned int > class TVector>
static Image	CastITKToImage (itk::Image< TVector< VLength >, VImageDimension > *img)

template<class TImageType>
static Image	CastITKToImage (TImageType *img)

static const itk::EventObject &	GetITKEventObject (EventEnum e)

template<typename T>
static std::ostream &	ToStringHelper (std::ostream &os, const T &v)

static std::ostream &	ToStringHelper (std::ostream &os, const char &v)

static std::ostream &	ToStringHelper (std::ostream &os, const signed char &v)

static std::ostream &	ToStringHelper (std::ostream &os, const unsigned char &v)

Member Typedef Documentation

◆ MemberFunctionType

using itk::simple::BinaryReconstructionByErosionImageFilter::MemberFunctionType

private

Initial value:

 Image (Self::*)(const Image *
    markerImage, const Image *
    maskImage)

Setup for member function dispatching

Definition at line 131 of file sitkBinaryReconstructionByErosionImageFilter.h.

◆ PixelIDTypeList

using itk::simple::BinaryReconstructionByErosionImageFilter::PixelIDTypeList = IntegerPixelIDTypeList

Define the pixels types supported by this filter

Definition at line 66 of file sitkBinaryReconstructionByErosionImageFilter.h.

◆ Self

using itk::simple::BinaryReconstructionByErosionImageFilter::Self = BinaryReconstructionByErosionImageFilter

Definition at line 56 of file sitkBinaryReconstructionByErosionImageFilter.h.

Constructor & Destructor Documentation

◆ ~BinaryReconstructionByErosionImageFilter()

virtual itk::simple::BinaryReconstructionByErosionImageFilter::~BinaryReconstructionByErosionImageFilter ( )

virtual

Destructor

◆ BinaryReconstructionByErosionImageFilter()

itk::simple::BinaryReconstructionByErosionImageFilter::BinaryReconstructionByErosionImageFilter ( )

Default Constructor that takes no arguments and initializes default parameters

Member Function Documentation

◆ Execute()

Image itk::simple::BinaryReconstructionByErosionImageFilter::Execute	(	const Image &	markerImage,
		const Image &	maskImage )

Execute the filter on the input image

◆ ExecuteInternal()

template<class TImageType>

Image itk::simple::BinaryReconstructionByErosionImageFilter::ExecuteInternal	(	const Image *	markerImage,
		const Image *	maskImage )

private

Referenced by detail::MemberFunctionAddressor< MemberFunctionType >.

◆ FullyConnectedOff()

void itk::simple::BinaryReconstructionByErosionImageFilter::FullyConnectedOff ( )

inline

Definition at line 109 of file sitkBinaryReconstructionByErosionImageFilter.h.

References SetFullyConnected().

◆ FullyConnectedOn()

void itk::simple::BinaryReconstructionByErosionImageFilter::FullyConnectedOn ( )

inline

Set the value of FullyConnected to true or false respectfully.

Definition at line 107 of file sitkBinaryReconstructionByErosionImageFilter.h.

References SetFullyConnected().

◆ GetBackgroundValue()

double itk::simple::BinaryReconstructionByErosionImageFilter::GetBackgroundValue ( ) const

inline

Set/Get the value used as "background" in the output image. Defaults to NumericTraits<PixelType>::NonpositiveMin() .

Definition at line 81 of file sitkBinaryReconstructionByErosionImageFilter.h.

References m_BackgroundValue.

◆ GetForegroundValue()

double itk::simple::BinaryReconstructionByErosionImageFilter::GetForegroundValue ( ) const

inline

Set/Get the value used as "foreground" in the output image. Defaults to NumericTraits<PixelType>::max() .

Definition at line 94 of file sitkBinaryReconstructionByErosionImageFilter.h.

References m_ForegroundValue.

◆ GetFullyConnected()

bool itk::simple::BinaryReconstructionByErosionImageFilter::GetFullyConnected ( ) const

inline

Set/Get whether the connected components are defined strictly by face connectivity or by face+edge+vertex connectivity. Default is FullyConnectedOff. For objects that are 1 pixel wide, use FullyConnectedOn.

Definition at line 115 of file sitkBinaryReconstructionByErosionImageFilter.h.

References m_FullyConnected.

◆ GetMemberFunctionFactory()

static const detail::MemberFunctionFactory< MemberFunctionType > & itk::simple::BinaryReconstructionByErosionImageFilter::GetMemberFunctionFactory ( )

staticprivate

◆ GetName()

std::string itk::simple::BinaryReconstructionByErosionImageFilter::GetName ( ) const

inlinevirtual

Name of this class

Implements itk::simple::ProcessObject.

Definition at line 119 of file sitkBinaryReconstructionByErosionImageFilter.h.

◆ SetBackgroundValue()

void itk::simple::BinaryReconstructionByErosionImageFilter::SetBackgroundValue ( double BackgroundValue )

inline

Set/Get the value used as "background" in the output image. Defaults to NumericTraits<PixelType>::NonpositiveMin() .

Definition at line 75 of file sitkBinaryReconstructionByErosionImageFilter.h.

References m_BackgroundValue.

◆ SetForegroundValue()

void itk::simple::BinaryReconstructionByErosionImageFilter::SetForegroundValue ( double ForegroundValue )

inline

Set/Get the value used as "foreground" in the output image. Defaults to NumericTraits<PixelType>::max() .

Definition at line 88 of file sitkBinaryReconstructionByErosionImageFilter.h.

References m_ForegroundValue.

◆ SetFullyConnected()

void itk::simple::BinaryReconstructionByErosionImageFilter::SetFullyConnected ( bool FullyConnected )

inline

Set/Get whether the connected components are defined strictly by face connectivity or by face+edge+vertex connectivity. Default is FullyConnectedOff. For objects that are 1 pixel wide, use FullyConnectedOn.

Definition at line 102 of file sitkBinaryReconstructionByErosionImageFilter.h.

References m_FullyConnected.

Referenced by FullyConnectedOff(), and FullyConnectedOn().