SimpleITK  2.1.0.dev86
Public Types | Public Member Functions | Private Types | Private Member Functions | Private Attributes | Friends | List of all members
itk::simple::BinaryFillholeImageFilter Class Reference

Remove holes not connected to the boundary of the image. More...

#include <sitkBinaryFillholeImageFilter.h>

+ Inheritance diagram for itk::simple::BinaryFillholeImageFilter:
+ Collaboration diagram for itk::simple::BinaryFillholeImageFilter:

Public Types

using PixelIDTypeList = IntegerPixelIDTypeList
 
using Self = BinaryFillholeImageFilter
 
- Public Types inherited from itk::simple::ImageFilter
using Self = ImageFilter
 
- Public Types inherited from itk::simple::ProcessObject
using Self = ProcessObject
 

Public Member Functions

 BinaryFillholeImageFilter ()
 
Image Execute (const Image &image1)
 
SelfFullyConnectedOff ()
 
SelfFullyConnectedOn ()
 
double GetForegroundValue () const
 
bool GetFullyConnected () const
 
std::string GetName () const
 
SelfSetForegroundValue (double ForegroundValue)
 
SelfSetFullyConnected (bool FullyConnected)
 
std::string ToString () const
 
virtual ~BinaryFillholeImageFilter ()
 
- Public Member Functions inherited from itk::simple::ImageFilter
 ImageFilter ()
 
virtual ~ImageFilter ()=0
 
- Public Member Functions inherited from itk::simple::ProcessObject
virtual void Abort ()
 
virtual int AddCommand (itk::simple::EventEnum event, const std::function< void()> &func)
 Directly add a callback to observe an event. More...
 
virtual int AddCommand (itk::simple::EventEnum event, itk::simple::Command &cmd)
 Add a Command Object to observer the event. More...
 
virtual float GetProgress () const
 An Active Measurement of the progress of execution. More...
 
virtual bool HasCommand (itk::simple::EventEnum event) const
 Query of this object has any registered commands for event. More...
 
 ProcessObject ()
 
virtual void RemoveAllCommands ()
 Remove all registered commands. More...
 
virtual ~ProcessObject ()
 
virtual void DebugOn ()
 
virtual void DebugOff ()
 
virtual bool GetDebug () const
 
virtual void SetDebug (bool debugFlag)
 
virtual void SetNumberOfThreads (unsigned int n)
 
virtual unsigned int GetNumberOfThreads () const
 
virtual void SetNumberOfWorkUnits (unsigned int n)
 
virtual unsigned int GetNumberOfWorkUnits () const
 

Private Types

using MemberFunctionType = Image(Self::*)(const Image &image1)
 

Private Member Functions

template<class TImageType >
Image ExecuteInternal (const Image &image1)
 

Private Attributes

double m_ForegroundValue {1.0}
 
bool m_FullyConnected {false}
 
std::unique_ptr< detail::MemberFunctionFactory< MemberFunctionType > > m_MemberFactory
 

Friends

struct detail::MemberFunctionAddressor< MemberFunctionType >
 

Additional Inherited Members

- Static Public Member Functions inherited from itk::simple::ProcessObject
static bool GetGlobalDefaultDebug ()
 
static void GlobalDefaultDebugOff ()
 
static void GlobalDefaultDebugOn ()
 
static void SetGlobalDefaultDebug (bool debugFlag)
 
static void GlobalWarningDisplayOn ()
 
static void GlobalWarningDisplayOff ()
 
static void SetGlobalWarningDisplay (bool flag)
 
static bool GetGlobalWarningDisplay ()
 
static double GetGlobalDefaultCoordinateTolerance ()
 Access the global tolerance to determine congruent spaces. More...
 
static void SetGlobalDefaultCoordinateTolerance (double)
 Access the global tolerance to determine congruent spaces. More...
 
static double GetGlobalDefaultDirectionTolerance ()
 Access the global tolerance to determine congruent spaces. More...
 
static void SetGlobalDefaultDirectionTolerance (double)
 Access the global tolerance to determine congruent spaces. More...
 
static bool SetGlobalDefaultThreader (const std::string &threader)
 Set/Get the default threader used for process objects. More...
 
static std::string GetGlobalDefaultThreader ()
 Set/Get the default threader used for process objects. More...
 
static void SetGlobalDefaultNumberOfThreads (unsigned int n)
 
static unsigned int GetGlobalDefaultNumberOfThreads ()
 Set/Get the default threader used for process objects. More...
 
- Protected Member Functions inherited from itk::simple::ImageFilter
void CheckImageMatchingDimension (const Image &image1, const Image &image2, const std::string &image2Name)
 
void CheckImageMatchingPixelType (const Image &image1, const Image &image2, const std::string &image2Name)
 
void CheckImageMatchingSize (const Image &image1, const Image &image2, const std::string &image2Name)
 
- Protected Member Functions inherited from itk::simple::ProcessObject
virtual unsigned long AddITKObserver (const itk::EventObject &, itk::Command *)
 
virtual itk::ProcessObjectGetActiveProcess ()
 
virtual void OnActiveProcessDelete ()
 
virtual void onCommandDelete (const itk::simple::Command *cmd) noexcept
 
virtual void PreUpdate (itk::ProcessObject *p)
 
virtual void RemoveITKObserver (EventCommand &e)
 
- Protected Member Functions inherited from itk::simple::NonCopyable
 NonCopyable ()=default
 
 NonCopyable (const NonCopyable &)=delete
 
NonCopyableoperator= (const NonCopyable &)=delete
 
- Static Protected Member Functions inherited from itk::simple::ImageFilter
template<class TImageType >
static void FixNonZeroIndex (TImageType *img)
 
- Static Protected Member Functions inherited from itk::simple::ProcessObject
template<class TImageType >
static TImageType::ConstPointer CastImageToITK (const Image &img)
 
template<class TPixelType , unsigned int VImageDimension, unsigned int VLength, template< typename, unsigned int > class TVector>
static Image CastITKToImage (itk::Image< TVector< TPixelType, VLength >, VImageDimension > *img)
 
template<class TImageType >
static Image CastITKToImage (TImageType *img)
 
static const itk::EventObjectGetITKEventObject (EventEnum e)
 
template<typename T >
static std::ostream & ToStringHelper (std::ostream &os, const T &v)
 
static std::ostream & ToStringHelper (std::ostream &os, const char &v)
 
static std::ostream & ToStringHelper (std::ostream &os, const signed char &v)
 
static std::ostream & ToStringHelper (std::ostream &os, const unsigned char &v)
 

Detailed Description

Remove holes not connected to the boundary of the image.

BinaryFillholeImageFilter fills holes in a binary image.

Geodesic morphology and the Fillhole algorithm is described in Chapter 6 of Pierre Soille's book "Morphological Image Analysis: Principles and Applications", Second Edition, Springer, 2003.

Author
Gaetan Lehmann. Biologie du Developpement et de la Reproduction, INRA de Jouy-en-Josas, France.

This implementation was taken from the Insight Journal paper: https://hdl.handle.net/1926/584 or http://www.insight-journal.org/browse/publication/176

See also
GrayscaleFillholeImageFilter
itk::simple::BinaryFillhole for the procedural interface
itk::BinaryFillholeImageFilter for the Doxygen on the original ITK class.

Definition at line 52 of file sitkBinaryFillholeImageFilter.h.

Member Typedef Documentation

◆ MemberFunctionType

using itk::simple::BinaryFillholeImageFilter::MemberFunctionType = Image (Self::*)( const Image& image1 )
private

Setup for member function dispatching

Definition at line 106 of file sitkBinaryFillholeImageFilter.h.

◆ PixelIDTypeList

Define the pixels types supported by this filter

Definition at line 64 of file sitkBinaryFillholeImageFilter.h.

◆ Self

Definition at line 54 of file sitkBinaryFillholeImageFilter.h.

Constructor & Destructor Documentation

◆ ~BinaryFillholeImageFilter()

virtual itk::simple::BinaryFillholeImageFilter::~BinaryFillholeImageFilter ( )
virtual

Destructor

◆ BinaryFillholeImageFilter()

itk::simple::BinaryFillholeImageFilter::BinaryFillholeImageFilter ( )

Default Constructor that takes no arguments and initializes default parameters

Member Function Documentation

◆ Execute()

Image itk::simple::BinaryFillholeImageFilter::Execute ( const Image image1)

Execute the filter on the input image

◆ ExecuteInternal()

template<class TImageType >
Image itk::simple::BinaryFillholeImageFilter::ExecuteInternal ( const Image image1)
private

◆ FullyConnectedOff()

Self& itk::simple::BinaryFillholeImageFilter::FullyConnectedOff ( )
inline

Definition at line 74 of file sitkBinaryFillholeImageFilter.h.

◆ FullyConnectedOn()

Self& itk::simple::BinaryFillholeImageFilter::FullyConnectedOn ( )
inline

Set the value of FullyConnected to true or false respectfully.

Definition at line 73 of file sitkBinaryFillholeImageFilter.h.

◆ GetForegroundValue()

double itk::simple::BinaryFillholeImageFilter::GetForegroundValue ( ) const
inline

Get the value in the image considered as "foreground". Defaults to maximum value of InputPixelType.

Definition at line 89 of file sitkBinaryFillholeImageFilter.h.

◆ GetFullyConnected()

bool itk::simple::BinaryFillholeImageFilter::GetFullyConnected ( ) const
inline

Set/Get whether the connected components are defined strictly by face connectivity or by face+edge+vertex connectivity. Default is FullyConnectedOff. For objects that are 1 pixel wide, use FullyConnectedOn.

Definition at line 79 of file sitkBinaryFillholeImageFilter.h.

◆ GetName()

std::string itk::simple::BinaryFillholeImageFilter::GetName ( ) const
inlinevirtual

Name of this class

Implements itk::simple::ProcessObject.

Definition at line 92 of file sitkBinaryFillholeImageFilter.h.

◆ SetForegroundValue()

Self& itk::simple::BinaryFillholeImageFilter::SetForegroundValue ( double  ForegroundValue)
inline

Set the value in the image to consider as "foreground". Defaults to maximum value of InputPixelType.

Definition at line 84 of file sitkBinaryFillholeImageFilter.h.

◆ SetFullyConnected()

Self& itk::simple::BinaryFillholeImageFilter::SetFullyConnected ( bool  FullyConnected)
inline

Set/Get whether the connected components are defined strictly by face connectivity or by face+edge+vertex connectivity. Default is FullyConnectedOff. For objects that are 1 pixel wide, use FullyConnectedOn.

Definition at line 70 of file sitkBinaryFillholeImageFilter.h.

◆ ToString()

std::string itk::simple::BinaryFillholeImageFilter::ToString ( ) const
virtual

Print ourselves out

Reimplemented from itk::simple::ProcessObject.

Friends And Related Function Documentation

◆ detail::MemberFunctionAddressor< MemberFunctionType >

Definition at line 110 of file sitkBinaryFillholeImageFilter.h.

Member Data Documentation

◆ m_ForegroundValue

double itk::simple::BinaryFillholeImageFilter::m_ForegroundValue {1.0}
private

Definition at line 118 of file sitkBinaryFillholeImageFilter.h.

◆ m_FullyConnected

bool itk::simple::BinaryFillholeImageFilter::m_FullyConnected {false}
private

Definition at line 116 of file sitkBinaryFillholeImageFilter.h.

◆ m_MemberFactory

std::unique_ptr<detail::MemberFunctionFactory<MemberFunctionType> > itk::simple::BinaryFillholeImageFilter::m_MemberFactory
private

Definition at line 112 of file sitkBinaryFillholeImageFilter.h.


The documentation for this class was generated from the following file: