itk::simple::AreaClosingImageFilter Class Reference

Morphological closing by attributes. More...

#include <sitkAreaClosingImageFilter.h>

Inheritance diagram for itk::simple::AreaClosingImageFilter:

Collaboration diagram for itk::simple::AreaClosingImageFilter:

Detailed Description

Morphological closing by attributes.

An attribute closing removes blobs according to criteria such as area. When applied to grayscale images they have the effect of filling valleys (regions darker than their surroundings) based on area while leaving the rest of the image unchanged.

This code was contributed in the Insight Journal paper

"Grayscale morphological attribute operations" by Beare R. https://doi.org/10.54294/ifvjls

Author

Richard Beare. Department of Medicine, Monash University, Melbourne, Australia.

See also

itk::simple::AreaClosing for the procedural interface

itk::AreaClosingImageFilter for the Doxygen on the original ITK class.

Definition at line 51 of file sitkAreaClosingImageFilter.h.

Public Types
using	PixelIDTypeList = BasicPixelIDTypeList
using	Self = AreaClosingImageFilter
Public Types inherited from itk::simple::ImageFilter
using	Self = ImageFilter
Public Types inherited from itk::simple::ProcessObject
using	Self = ProcessObject

Public Member Functions
	AreaClosingImageFilter ()
Image	Execute (const Image &image1)
void	FullyConnectedOff ()
void	FullyConnectedOn ()
bool	GetFullyConnected () const
double	GetLambda () const
std::string	GetName () const
bool	GetUseImageSpacing () const
void	SetFullyConnected (bool FullyConnected)
void	SetLambda (double Lambda)
	The size of the area opening.
void	SetUseImageSpacing (bool UseImageSpacing)
std::string	ToString () const
void	UseImageSpacingOff ()
void	UseImageSpacingOn ()
virtual	~AreaClosingImageFilter ()
Public Member Functions inherited from itk::simple::ImageFilter
	ImageFilter ()
virtual	~ImageFilter ()=0
Public Member Functions inherited from itk::simple::ProcessObject
virtual void	Abort ()
virtual int	AddCommand (itk::simple::EventEnum event, const std::function< void()> &func)
	Directly add a callback to observe an event.
virtual int	AddCommand (itk::simple::EventEnum event, itk::simple::Command &cmd)
	Add a Command Object to observer the event.
virtual float	GetProgress () const
	An Active Measurement of the progress of execution.
virtual bool	HasCommand (itk::simple::EventEnum event) const
	Query of this object has any registered commands for event.
	ProcessObject ()
virtual void	RemoveAllCommands ()
	Remove all registered commands.
virtual	~ProcessObject ()
virtual void	DebugOn ()
virtual void	DebugOff ()
virtual bool	GetDebug () const
virtual void	SetDebug (bool debugFlag)
virtual void	SetNumberOfThreads (unsigned int n)
virtual unsigned int	GetNumberOfThreads () const
virtual void	SetNumberOfWorkUnits (unsigned int n)
virtual unsigned int	GetNumberOfWorkUnits () const

Private Types
using	MemberFunctionType = Image (Self::*)(const Image &image1)

Private Member Functions
template<class TImageType>
Image	ExecuteInternal (const Image &image1)

Static Private Member Functions
static const detail::MemberFunctionFactory< MemberFunctionType > &	GetMemberFunctionFactory ()

Private Attributes
bool	m_FullyConnected { false }
double	m_Lambda { 0.0 }
bool	m_UseImageSpacing { true }

Friends
struct	detail::MemberFunctionAddressor< MemberFunctionType >

Additional Inherited Members
Static Public Member Functions inherited from itk::simple::ProcessObject
static bool	GetGlobalDefaultDebug ()
static void	GlobalDefaultDebugOff ()
static void	GlobalDefaultDebugOn ()
static void	SetGlobalDefaultDebug (bool debugFlag)
static void	GlobalWarningDisplayOn ()
static void	GlobalWarningDisplayOff ()
static void	SetGlobalWarningDisplay (bool flag)
static bool	GetGlobalWarningDisplay ()
static double	GetGlobalDefaultCoordinateTolerance ()
	Access the global tolerance to determine congruent spaces.
static void	SetGlobalDefaultCoordinateTolerance (double)
	Access the global tolerance to determine congruent spaces.
static double	GetGlobalDefaultDirectionTolerance ()
	Access the global tolerance to determine congruent spaces.
static void	SetGlobalDefaultDirectionTolerance (double)
	Access the global tolerance to determine congruent spaces.
static bool	SetGlobalDefaultThreader (const std::string &threader)
	Set/Get the default threader used for process objects.
static std::string	GetGlobalDefaultThreader ()
	Set/Get the default threader used for process objects.
static void	SetGlobalDefaultNumberOfThreads (unsigned int n)
static unsigned int	GetGlobalDefaultNumberOfThreads ()
	Set/Get the default threader used for process objects.
Protected Member Functions inherited from itk::simple::ImageFilter
void	CheckImageMatchingDimension (const Image &image1, const Image &image2, const std::string &image2Name)
void	CheckImageMatchingPixelType (const Image &image1, const Image &image2, const std::string &image2Name)
void	CheckImageMatchingSize (const Image &image1, const Image &image2, const std::string &image2Name)
Protected Member Functions inherited from itk::simple::ProcessObject
virtual unsigned long	AddITKObserver (const itk::EventObject &, itk::Command *)
virtual itk::ProcessObject *	GetActiveProcess ()
virtual void	OnActiveProcessDelete ()
virtual void	onCommandDelete (const itk::simple::Command *cmd) noexcept
virtual void	PreUpdate (itk::ProcessObject *p)
virtual void	RemoveITKObserver (EventCommand &e)
Protected Member Functions inherited from itk::simple::NonCopyable
	NonCopyable ()=default
	NonCopyable (const NonCopyable &)=delete
NonCopyable &	operator= (const NonCopyable &)=delete
Static Protected Member Functions inherited from itk::simple::ImageFilter
template<class TImageType>
static void	FixNonZeroIndex (TImageType *img)
Static Protected Member Functions inherited from itk::simple::ProcessObject
template<class TImageType>
static TImageType::ConstPointer	CastImageToITK (const Image &img)
template<class TPixelType, unsigned int VImageDimension, unsigned int VLength, template< typename, unsigned int > class TVector>
static Image	CastITKToImage (itk::Image< TVector< TPixelType, VLength >, VImageDimension > *img)
template<unsigned int VImageDimension, unsigned int VLength, template< unsigned int > class TVector>
static Image	CastITKToImage (itk::Image< TVector< VLength >, VImageDimension > *img)
template<class TImageType>
static Image	CastITKToImage (TImageType *img)
static const itk::EventObject &	GetITKEventObject (EventEnum e)
template<typename T>
static std::ostream &	ToStringHelper (std::ostream &os, const T &v)
static std::ostream &	ToStringHelper (std::ostream &os, const char &v)
static std::ostream &	ToStringHelper (std::ostream &os, const signed char &v)
static std::ostream &	ToStringHelper (std::ostream &os, const unsigned char &v)

Member Typedef Documentation

MemberFunctionType

using itk::simple::AreaClosingImageFilter::MemberFunctionType = Image (Self::*)(const Image &image1)

private

Setup for member function dispatching

Definition at line 129 of file sitkAreaClosingImageFilter.h.

PixelIDTypeList

using itk::simple::AreaClosingImageFilter::PixelIDTypeList = BasicPixelIDTypeList

Define the pixels types supported by this filter

Definition at line 63 of file sitkAreaClosingImageFilter.h.

Self

using itk::simple::AreaClosingImageFilter::Self = AreaClosingImageFilter

Definition at line 53 of file sitkAreaClosingImageFilter.h.

Constructor & Destructor Documentation

~AreaClosingImageFilter()

virtual itk::simple::AreaClosingImageFilter::~AreaClosingImageFilter ( )

virtual

Destructor

AreaClosingImageFilter()

itk::simple::AreaClosingImageFilter::AreaClosingImageFilter

(

)

Default Constructor that takes no arguments and initializes default parameters

Member Function Documentation

Execute()

Image itk::simple::AreaClosingImageFilter::Execute

(

const Image &

image1

)

Execute the filter on the input image

ExecuteInternal()

template<class TImageType>

Image itk::simple::AreaClosingImageFilter::ExecuteInternal ( const Image & image1 )

private

Referenced by detail::MemberFunctionAddressor< MemberFunctionType >.

FullyConnectedOff()

void itk::simple::AreaClosingImageFilter::FullyConnectedOff ( )

inline

Definition at line 109 of file sitkAreaClosingImageFilter.h.

References SetFullyConnected().

FullyConnectedOn()

void itk::simple::AreaClosingImageFilter::FullyConnectedOn ( )

inline

Set the value of FullyConnected to true or false respectfully.

Definition at line 107 of file sitkAreaClosingImageFilter.h.

References SetFullyConnected().

GetFullyConnected()

bool itk::simple::AreaClosingImageFilter::GetFullyConnected ( ) const

inline

Definition at line 113 of file sitkAreaClosingImageFilter.h.

References m_FullyConnected.

GetLambda()

double itk::simple::AreaClosingImageFilter::GetLambda ( ) const

inline

Definition at line 77 of file sitkAreaClosingImageFilter.h.

References m_Lambda.

GetMemberFunctionFactory()

static const detail::MemberFunctionFactory< MemberFunctionType > & itk::simple::AreaClosingImageFilter::GetMemberFunctionFactory ( )

staticprivate

GetName()

std::string itk::simple::AreaClosingImageFilter::GetName ( ) const

inlinevirtual

Name of this class

Implements itk::simple::ProcessObject.

Definition at line 117 of file sitkAreaClosingImageFilter.h.

GetUseImageSpacing()

bool itk::simple::AreaClosingImageFilter::GetUseImageSpacing ( ) const

inline

Set/Get whether the image spacing is used or not - defaults to true.

Definition at line 96 of file sitkAreaClosingImageFilter.h.

References m_UseImageSpacing.

SetFullyConnected()

void itk::simple::AreaClosingImageFilter::SetFullyConnected ( bool FullyConnected )

inline

Definition at line 102 of file sitkAreaClosingImageFilter.h.

References m_FullyConnected.

Referenced by FullyConnectedOff(), and FullyConnectedOn().

SetLambda()

void itk::simple::AreaClosingImageFilter::SetLambda ( double Lambda )

inline

The size of the area opening.

Definition at line 72 of file sitkAreaClosingImageFilter.h.

References m_Lambda.

SetUseImageSpacing()

void itk::simple::AreaClosingImageFilter::SetUseImageSpacing ( bool UseImageSpacing )

inline

Set/Get whether the image spacing is used or not - defaults to true.

Definition at line 84 of file sitkAreaClosingImageFilter.h.

References m_UseImageSpacing.

Referenced by UseImageSpacingOff(), and UseImageSpacingOn().

ToString()

std::string itk::simple::AreaClosingImageFilter::ToString ( ) const

virtual

Print ourselves out

Reimplemented from itk::simple::ProcessObject.

UseImageSpacingOff()

void itk::simple::AreaClosingImageFilter::UseImageSpacingOff ( )

inline

Definition at line 91 of file sitkAreaClosingImageFilter.h.

References SetUseImageSpacing().

UseImageSpacingOn()

void itk::simple::AreaClosingImageFilter::UseImageSpacingOn ( )

inline

Set the value of UseImageSpacing to true or false respectfully.

Definition at line 89 of file sitkAreaClosingImageFilter.h.

References SetUseImageSpacing().

Friends And Related Symbol Documentation

detail::MemberFunctionAddressor< MemberFunctionType >

friend struct detail::MemberFunctionAddressor< MemberFunctionType >

friend

Definition at line 130 of file sitkAreaClosingImageFilter.h.

References ExecuteInternal().

Member Data Documentation

m_FullyConnected

bool itk::simple::AreaClosingImageFilter::m_FullyConnected { false }

private

Definition at line 139 of file sitkAreaClosingImageFilter.h.

Referenced by GetFullyConnected(), and SetFullyConnected().

m_Lambda

double itk::simple::AreaClosingImageFilter::m_Lambda { 0.0 }

private

Definition at line 135 of file sitkAreaClosingImageFilter.h.

Referenced by GetLambda(), and SetLambda().

m_UseImageSpacing

bool itk::simple::AreaClosingImageFilter::m_UseImageSpacing { true }

private

Definition at line 137 of file sitkAreaClosingImageFilter.h.

Referenced by GetUseImageSpacing(), and SetUseImageSpacing().

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The documentation for this class was generated from the following file:

• sitkAreaClosingImageFilter.h