SimpleITK
1.2.4
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Produce a binary image where foreground is the regional maxima of the input image. More...
#include <sitkRegionalMaximaImageFilter.h>
Public Types | |
typedef ScalarPixelIDTypeList | PixelIDTypeList |
typedef RegionalMaximaImageFilter | Self |
Public Types inherited from itk::simple::ImageFilter< 1 > | |
typedef ImageFilter | Self |
Public Types inherited from itk::simple::ProcessObject | |
typedef ProcessObject | Self |
Public Member Functions | |
Image | Execute (const Image &image1) |
Image | Execute (const Image &image1, double backgroundValue, double foregroundValue, bool fullyConnected, bool flatIsMaxima) |
Self & | FlatIsMaximaOff () |
Self & | FlatIsMaximaOn () |
Self & | FullyConnectedOff () |
Self & | FullyConnectedOn () |
double | GetBackgroundValue () const |
bool | GetFlatIsMaxima () const |
double | GetForegroundValue () const |
bool | GetFullyConnected () const |
std::string | GetName () const |
RegionalMaximaImageFilter () | |
Self & | SetBackgroundValue (double BackgroundValue) |
Self & | SetFlatIsMaxima (bool FlatIsMaxima) |
Self & | SetForegroundValue (double ForegroundValue) |
Self & | SetFullyConnected (bool FullyConnected) |
std::string | ToString () const |
virtual | ~RegionalMaximaImageFilter () |
Public Member Functions inherited from itk::simple::ImageFilter< 1 > | |
ImageFilter () | |
virtual | ~ImageFilter ()=0 |
Public Member Functions inherited from itk::simple::ProcessObject | |
virtual void | Abort () |
virtual int | AddCommand (itk::simple::EventEnum event, itk::simple::Command &cmd) |
Add a Command Object to observer the event. More... | |
virtual float | GetProgress () const |
An Active Measurement of the progress of execution. More... | |
virtual bool | HasCommand (itk::simple::EventEnum event) const |
Query of this object has any registered commands for event. More... | |
ProcessObject () | |
virtual void | RemoveAllCommands () |
Remove all registered commands. More... | |
virtual | ~ProcessObject () |
virtual void | DebugOn () |
virtual void | DebugOff () |
virtual bool | GetDebug () const |
virtual void | SetDebug (bool debugFlag) |
virtual void | SetNumberOfThreads (unsigned int n) |
virtual unsigned int | GetNumberOfThreads () const |
Private Types | |
typedef Image(Self::* | MemberFunctionType) (const Image &image1) |
Private Member Functions | |
template<class TImageType > | |
Image | ExecuteInternal (const Image &image1) |
Private Attributes | |
double | m_BackgroundValue |
bool | m_FlatIsMaxima |
double | m_ForegroundValue |
bool | m_FullyConnected |
nsstd::auto_ptr< detail::MemberFunctionFactory< MemberFunctionType > > | m_MemberFactory |
Friends | |
struct | detail::MemberFunctionAddressor< MemberFunctionType > |
Additional Inherited Members | |
Static Public Member Functions inherited from itk::simple::ProcessObject | |
static bool | GetGlobalDefaultDebug () |
static void | GlobalDefaultDebugOff () |
static void | GlobalDefaultDebugOn () |
static void | SetGlobalDefaultDebug (bool debugFlag) |
static void | GlobalWarningDisplayOn () |
static void | GlobalWarningDisplayOff () |
static void | SetGlobalWarningDisplay (bool flag) |
static bool | GetGlobalWarningDisplay () |
static void | SetGlobalDefaultNumberOfThreads (unsigned int n) |
static unsigned int | GetGlobalDefaultNumberOfThreads () |
static double | GetGlobalDefaultCoordinateTolerance () |
Access the global tolerance to determine congruent spaces. More... | |
static void | SetGlobalDefaultCoordinateTolerance (double) |
Access the global tolerance to determine congruent spaces. More... | |
static double | GetGlobalDefaultDirectionTolerance () |
Access the global tolerance to determine congruent spaces. More... | |
static void | SetGlobalDefaultDirectionTolerance (double) |
Access the global tolerance to determine congruent spaces. More... | |
Protected Member Functions inherited from itk::simple::ProcessObject | |
virtual unsigned long | AddITKObserver (const itk::EventObject &, itk::Command *) |
virtual itk::ProcessObject * | GetActiveProcess () |
virtual void | OnActiveProcessDelete () |
virtual void | onCommandDelete (const itk::simple::Command *cmd) SITK_NOEXCEPT |
virtual void | PreUpdate (itk::ProcessObject *p) |
virtual void | RemoveITKObserver (EventCommand &e) |
Protected Member Functions inherited from itk::simple::NonCopyable | |
NonCopyable () | |
Static Protected Member Functions inherited from itk::simple::ImageFilter< 1 > | |
static void | FixNonZeroIndex (TImageType *img) |
Static Protected Member Functions inherited from itk::simple::ProcessObject | |
template<class TImageType > | |
static TImageType::ConstPointer | CastImageToITK (const Image &img) |
template<class TImageType > | |
static Image | CastITKToImage (TImageType *img) |
template<class TPixelType , unsigned int VImageDimension, unsigned int VLength, template< typename, unsigned int > class TVector> | |
static Image | CastITKToImage (itk::Image< TVector< TPixelType, VLength >, VImageDimension > *img) |
static const itk::EventObject & | GetITKEventObject (EventEnum e) |
template<typename T > | |
static std::ostream & | ToStringHelper (std::ostream &os, const T &v) |
static std::ostream & | ToStringHelper (std::ostream &os, const char &v) |
static std::ostream & | ToStringHelper (std::ostream &os, const signed char &v) |
static std::ostream & | ToStringHelper (std::ostream &os, const unsigned char &v) |
Produce a binary image where foreground is the regional maxima of the input image.
Regional maxima are flat zones surrounded by pixels of lower value.
If the input image is constant, the entire image can be considered as a maxima or not. The desired behavior can be selected with the SetFlatIsMaxima() method.
This class was contributed to the Insight Journal by author Gaetan Lehmann. Biologie du Developpement et de la Reproduction, INRA de Jouy-en-Josas, France. The paper can be found at https://hdl.handle.net/1926/153
Definition at line 54 of file sitkRegionalMaximaImageFilter.h.
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Setup for member function dispatching
Definition at line 135 of file sitkRegionalMaximaImageFilter.h.
Define the pixels types supported by this filter
Definition at line 66 of file sitkRegionalMaximaImageFilter.h.
Definition at line 56 of file sitkRegionalMaximaImageFilter.h.
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Destructor
itk::simple::RegionalMaximaImageFilter::RegionalMaximaImageFilter | ( | ) |
Default Constructor that takes no arguments and initializes default parameters
Execute the filter on the input image
Image itk::simple::RegionalMaximaImageFilter::Execute | ( | const Image & | image1, |
double | backgroundValue, | ||
double | foregroundValue, | ||
bool | fullyConnected, | ||
bool | flatIsMaxima | ||
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Execute the filter on the input image with the given parameters
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Definition at line 111 of file sitkRegionalMaximaImageFilter.h.
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Set the value of FlatIsMaxima to true or false respectfully.
Definition at line 110 of file sitkRegionalMaximaImageFilter.h.
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Definition at line 97 of file sitkRegionalMaximaImageFilter.h.
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Set the value of FullyConnected to true or false respectfully.
Definition at line 96 of file sitkRegionalMaximaImageFilter.h.
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Set/Get the value used as "background" in the output image. Defaults to NumericTraits<PixelType>::NonpositiveMin() .
Definition at line 78 of file sitkRegionalMaximaImageFilter.h.
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Set/Get wether a flat image must be considered as a maxima or not. Defaults to true.
Definition at line 116 of file sitkRegionalMaximaImageFilter.h.
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Set/Get the value in the output image to consider as "foreground". Defaults to maximum value of PixelType.
Definition at line 88 of file sitkRegionalMaximaImageFilter.h.
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Set/Get whether the connected components are defined strictly by face connectivity or by face+edge+vertex connectivity. Default is FullyConnectedOff. For objects that are 1 pixel wide, use FullyConnectedOn.
Definition at line 102 of file sitkRegionalMaximaImageFilter.h.
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Name of this class
Implements itk::simple::ProcessObject.
Definition at line 118 of file sitkRegionalMaximaImageFilter.h.
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Set/Get the value used as "background" in the output image. Defaults to NumericTraits<PixelType>::NonpositiveMin() .
Definition at line 73 of file sitkRegionalMaximaImageFilter.h.
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Set/Get wether a flat image must be considered as a maxima or not. Defaults to true.
Definition at line 107 of file sitkRegionalMaximaImageFilter.h.
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Set/Get the value in the output image to consider as "foreground". Defaults to maximum value of PixelType.
Definition at line 83 of file sitkRegionalMaximaImageFilter.h.
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Set/Get whether the connected components are defined strictly by face connectivity or by face+edge+vertex connectivity. Default is FullyConnectedOff. For objects that are 1 pixel wide, use FullyConnectedOn.
Definition at line 93 of file sitkRegionalMaximaImageFilter.h.
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Print ourselves out
Reimplemented from itk::simple::ProcessObject.
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Definition at line 139 of file sitkRegionalMaximaImageFilter.h.
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Definition at line 145 of file sitkRegionalMaximaImageFilter.h.
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Definition at line 150 of file sitkRegionalMaximaImageFilter.h.
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Definition at line 147 of file sitkRegionalMaximaImageFilter.h.
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Definition at line 149 of file sitkRegionalMaximaImageFilter.h.
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Definition at line 141 of file sitkRegionalMaximaImageFilter.h.