itk::simple::LabelMapMaskImageFilter Class Reference

Mask and image with a LabelMap . More...

#include <sitkLabelMapMaskImageFilter.h>

Inheritance diagram for itk::simple::LabelMapMaskImageFilter:

Collaboration diagram for itk::simple::LabelMapMaskImageFilter:

Public Types
typedef LabelPixelIDTypeList	PixelIDTypeList
typedef LabelMapMaskImageFilter	Self
Public Types inherited from itk::simple::ImageFilter< 0 >
typedef ImageFilter	Self
Public Types inherited from itk::simple::ProcessObject
typedef ProcessObject	Self

Public Member Functions
Self &	CropOff ()
Self &	CropOn ()
Image	Execute (const Image &labelMapImage, const Image &featureImage)
Image	Execute (const Image &labelMapImage, const Image &featureImage, uint64_t label, double backgroundValue, bool negated, bool crop, const std::vector< unsigned int > &cropBorder)
double	GetBackgroundValue () const
bool	GetCrop () const
std::vector< unsigned int >	GetCropBorder () const
uint64_t	GetLabel () const
std::string	GetName () const
bool	GetNegated () const
	LabelMapMaskImageFilter ()
Self &	NegatedOff ()
Self &	NegatedOn ()
Self &	SetBackgroundValue (double BackgroundValue)
Self &	SetCrop (bool Crop)
Self &	SetCropBorder (const std::vector< unsigned int > &CropBorder)
Self &	SetCropBorder (unsigned int value)
Self &	SetLabel (uint64_t Label)
Self &	SetNegated (bool Negated)
std::string	ToString () const
virtual	~LabelMapMaskImageFilter ()
Public Member Functions inherited from itk::simple::ImageFilter< 0 >
	ImageFilter ()
virtual	~ImageFilter ()=0
Public Member Functions inherited from itk::simple::ProcessObject
virtual void	Abort ()
virtual int	AddCommand (itk::simple::EventEnum event, itk::simple::Command &cmd)
	Add a Command Object to observer the event. More...
virtual float	GetProgress () const
	An Active Measurement of the progress of execution. More...
virtual bool	HasCommand (itk::simple::EventEnum event) const
	Query of this object has any registered commands for event. More...
	ProcessObject ()
virtual void	RemoveAllCommands ()
	Remove all registered commands. More...
virtual	~ProcessObject ()
virtual void	DebugOn ()
virtual void	DebugOff ()
virtual bool	GetDebug () const
virtual void	SetDebug (bool debugFlag)
virtual void	SetNumberOfThreads (unsigned int n)
virtual unsigned int	GetNumberOfThreads () const

Private Types
typedef Image(Self::*	MemberFunctionType) (const Image *labelMapImage, const Image *featureImage)

Private Member Functions
template<class TImageType1 , class TImageType2 >
Image	DualExecuteInternal (const Image *labelMapImage, const Image *featureImage)

Private Attributes
double	m_BackgroundValue
bool	m_Crop
std::vector< unsigned int >	m_CropBorder
nsstd::auto_ptr< detail::DualMemberFunctionFactory< MemberFunctionType > >	m_DualMemberFactory
uint64_t	m_Label
bool	m_Negated

Friends
struct	detail::DualExecuteInternalAddressor< MemberFunctionType >

Additional Inherited Members
Static Public Member Functions inherited from itk::simple::ProcessObject
static bool	GetGlobalDefaultDebug ()
static void	GlobalDefaultDebugOff ()
static void	GlobalDefaultDebugOn ()
static void	SetGlobalDefaultDebug (bool debugFlag)
static void	GlobalWarningDisplayOn ()
static void	GlobalWarningDisplayOff ()
static void	SetGlobalWarningDisplay (bool flag)
static bool	GetGlobalWarningDisplay ()
static void	SetGlobalDefaultNumberOfThreads (unsigned int n)
static unsigned int	GetGlobalDefaultNumberOfThreads ()
static double	GetGlobalDefaultCoordinateTolerance ()
	Access the global tolerance to determine congruent spaces. More...
static void	SetGlobalDefaultCoordinateTolerance (double)
	Access the global tolerance to determine congruent spaces. More...
static double	GetGlobalDefaultDirectionTolerance ()
	Access the global tolerance to determine congruent spaces. More...
static void	SetGlobalDefaultDirectionTolerance (double)
	Access the global tolerance to determine congruent spaces. More...
Protected Member Functions inherited from itk::simple::ProcessObject
virtual unsigned long	AddITKObserver (const itk::EventObject &, itk::Command *)
virtual itk::ProcessObject *	GetActiveProcess ()
virtual void	OnActiveProcessDelete ()
virtual void	onCommandDelete (const itk::simple::Command *cmd) SITK_NOEXCEPT
virtual void	PreUpdate (itk::ProcessObject *p)
virtual void	RemoveITKObserver (EventCommand &e)
Protected Member Functions inherited from itk::simple::NonCopyable
	NonCopyable ()
Static Protected Member Functions inherited from itk::simple::ImageFilter< 0 >
static void	FixNonZeroIndex (TImageType *img)
Static Protected Member Functions inherited from itk::simple::ProcessObject
template<class TImageType >
static TImageType::ConstPointer	CastImageToITK (const Image &img)
template<class TImageType >
static Image	CastITKToImage (TImageType *img)
template<class TPixelType , unsigned int VImageDimension, unsigned int VLength, template< typename, unsigned int > class TVector>
static Image	CastITKToImage (itk::Image< TVector< TPixelType, VLength >, VImageDimension > *img)
static const itk::EventObject &	GetITKEventObject (EventEnum e)
template<typename T >
static std::ostream &	ToStringHelper (std::ostream &os, const T &v)
static std::ostream &	ToStringHelper (std::ostream &os, const char &v)
static std::ostream &	ToStringHelper (std::ostream &os, const signed char &v)
static std::ostream &	ToStringHelper (std::ostream &os, const unsigned char &v)

Detailed Description

Mask and image with a LabelMap .

LabelMapMaskImageFilter mask the content of an input image according to the content of the input LabelMap . The masked pixel of the input image are set to the BackgroundValue. LabelMapMaskImageFilter can keep the input image for one label only, with Negated = false (the default) or it can mask the input image for a single label, when Negated equals true. In Both cases, the label is set with SetLabel() .

Author

Gaetan Lehmann. Biologie du Developpement et de la Reproduction, INRA de Jouy-en-Josas, France.

This implementation was taken from the Insight Journal paper: https://hdl.handle.net/1926/584 or http://www.insight-journal.org/browse/publication/176

See also

LabelMapToBinaryImageFilter , LabelMapToLabelImageFilter

itk::simple::LabelMapMask for the procedural interface

itk::LabelMapMaskImageFilter for the Doxygen on the original ITK class.

Definition at line 49 of file sitkLabelMapMaskImageFilter.h.

Member Typedef Documentation

typedef Image(Self::* itk::simple::LabelMapMaskImageFilter::MemberFunctionType) (const Image *labelMapImage, const Image *featureImage)

private

Setup for member function dispatching

Definition at line 143 of file sitkLabelMapMaskImageFilter.h.

typedef LabelPixelIDTypeList itk::simple::LabelMapMaskImageFilter::PixelIDTypeList

Define the pixels types supported by this filter

Definition at line 61 of file sitkLabelMapMaskImageFilter.h.

typedef LabelMapMaskImageFilter itk::simple::LabelMapMaskImageFilter::Self

Definition at line 51 of file sitkLabelMapMaskImageFilter.h.

Constructor & Destructor Documentation

virtual itk::simple::LabelMapMaskImageFilter::~LabelMapMaskImageFilter ( )

virtual

Destructor

itk::simple::LabelMapMaskImageFilter::LabelMapMaskImageFilter

(

)

Default Constructor that takes no arguments and initializes default parameters

Member Function Documentation

Self& itk::simple::LabelMapMaskImageFilter::CropOff ( )

inline

Definition at line 106 of file sitkLabelMapMaskImageFilter.h.

Self& itk::simple::LabelMapMaskImageFilter::CropOn ( )

inline

Set the value of Crop to true or false respectfully.

Definition at line 105 of file sitkLabelMapMaskImageFilter.h.

template<class TImageType1 , class TImageType2 >

Image itk::simple::LabelMapMaskImageFilter::DualExecuteInternal ( const Image *  labelMapImage, const Image *  featureImage  )

private

Image itk::simple::LabelMapMaskImageFilter::Execute	(	const Image &	labelMapImage,
		const Image &	featureImage
	)

Execute the filter on the input image

Image itk::simple::LabelMapMaskImageFilter::Execute	(	const Image &	labelMapImage,
		const Image &	featureImage,
		uint64_t	label,
		double	backgroundValue,
		bool	negated,
		bool	crop,
		const std::vector< unsigned int > &	cropBorder
	)

Execute the filter on the input image with the given parameters

double itk::simple::LabelMapMaskImageFilter::GetBackgroundValue ( ) const

inline

Set/Get the value used as "background" in the output image. Defaults to NumericTraits<PixelType>::ZeroValue() .

Definition at line 83 of file sitkLabelMapMaskImageFilter.h.

bool itk::simple::LabelMapMaskImageFilter::GetCrop ( ) const

inline

Set/Get whether the image size should be adjusted to the masked image or not.

Definition at line 111 of file sitkLabelMapMaskImageFilter.h.

std::vector<unsigned int> itk::simple::LabelMapMaskImageFilter::GetCropBorder ( ) const

inline

Set/Get the boder added to the mask before the crop. The default is 0 on all the axes.

Definition at line 125 of file sitkLabelMapMaskImageFilter.h.

uint64_t itk::simple::LabelMapMaskImageFilter::GetLabel ( ) const

inline

The label to mask or to not mask, depending on the value of the Negated ivar.

Definition at line 73 of file sitkLabelMapMaskImageFilter.h.

std::string itk::simple::LabelMapMaskImageFilter::GetName ( ) const

inlinevirtual

Name of this class

Implements itk::simple::ProcessObject.

Definition at line 127 of file sitkLabelMapMaskImageFilter.h.

bool itk::simple::LabelMapMaskImageFilter::GetNegated ( ) const

inline

Set/Get whether the Label should be masked or not.

Definition at line 97 of file sitkLabelMapMaskImageFilter.h.

Self& itk::simple::LabelMapMaskImageFilter::NegatedOff ( )

inline

Definition at line 92 of file sitkLabelMapMaskImageFilter.h.

Self& itk::simple::LabelMapMaskImageFilter::NegatedOn ( )

inline

Set the value of Negated to true or false respectfully.

Definition at line 91 of file sitkLabelMapMaskImageFilter.h.

Self& itk::simple::LabelMapMaskImageFilter::SetBackgroundValue ( double  BackgroundValue )

inline

Set/Get the value used as "background" in the output image. Defaults to NumericTraits<PixelType>::ZeroValue() .

Definition at line 78 of file sitkLabelMapMaskImageFilter.h.

Self& itk::simple::LabelMapMaskImageFilter::SetCrop ( bool  Crop )

inline

Set/Get whether the image size should be adjusted to the masked image or not.

Definition at line 102 of file sitkLabelMapMaskImageFilter.h.

References itk::simple::Crop().

Self& itk::simple::LabelMapMaskImageFilter::SetCropBorder ( const std::vector< unsigned int > &  CropBorder )

inline

Set/Get the boder added to the mask before the crop. The default is 0 on all the axes.

Definition at line 116 of file sitkLabelMapMaskImageFilter.h.

Self& itk::simple::LabelMapMaskImageFilter::SetCropBorder ( unsigned int  value )

inline

Set the values of the CropBorder vector all to value

Definition at line 119 of file sitkLabelMapMaskImageFilter.h.

Self& itk::simple::LabelMapMaskImageFilter::SetLabel ( uint64_t  Label )

inline

The label to mask or to not mask, depending on the value of the Negated ivar.

Definition at line 68 of file sitkLabelMapMaskImageFilter.h.

Self& itk::simple::LabelMapMaskImageFilter::SetNegated ( bool  Negated )

inline

Set/Get whether the Label should be masked or not.

Definition at line 88 of file sitkLabelMapMaskImageFilter.h.

std::string itk::simple::LabelMapMaskImageFilter::ToString ( ) const

virtual

Print ourselves out

Reimplemented from itk::simple::ProcessObject.

Friends And Related Function Documentation

friend struct detail::DualExecuteInternalAddressor< MemberFunctionType >

friend

Definition at line 145 of file sitkLabelMapMaskImageFilter.h.

Member Data Documentation

double itk::simple::LabelMapMaskImageFilter::m_BackgroundValue

private

Definition at line 156 of file sitkLabelMapMaskImageFilter.h.

bool itk::simple::LabelMapMaskImageFilter::m_Crop

private

Definition at line 160 of file sitkLabelMapMaskImageFilter.h.

std::vector<unsigned int> itk::simple::LabelMapMaskImageFilter::m_CropBorder

private

Definition at line 161 of file sitkLabelMapMaskImageFilter.h.

nsstd::auto_ptr<detail::DualMemberFunctionFactory<MemberFunctionType> > itk::simple::LabelMapMaskImageFilter::m_DualMemberFactory

private

Definition at line 149 of file sitkLabelMapMaskImageFilter.h.

uint64_t itk::simple::LabelMapMaskImageFilter::m_Label

private

Definition at line 154 of file sitkLabelMapMaskImageFilter.h.

bool itk::simple::LabelMapMaskImageFilter::m_Negated

private

Definition at line 158 of file sitkLabelMapMaskImageFilter.h.

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The documentation for this class was generated from the following file:

• sitkLabelMapMaskImageFilter.h