ImageViewing/ImageViewing.py

# =========================================================================
#
#  Copyright NumFOCUS
#
#  Licensed under the Apache License, Version 2.0 (the "License");
#  you may not use this file except in compliance with the License.
#  You may obtain a copy of the License at
#
#         http://www.apache.org/licenses/LICENSE-2.0.txt
#
#  Unless required by applicable law or agreed to in writing, software
#  distributed under the License is distributed on an "AS IS" BASIS,
#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
#  See the License for the specific language governing permissions and
#  limitations under the License.
#
# =========================================================================
 
""" A SimpleITK example demonstrating image viewing using the Show function
    and an external application. """
 
import sys
import SimpleITK as sitk
 
grid_image = sitk.GridSource(
    outputPixelType=sitk.sitkUInt16,
    size=(512, 512),
    sigma=(0.1, 0.1),
    gridSpacing=(20.0, 20.0),
)
 
# Procedural interface, using the default image viewer (Fiji/ImageJ) or
# any viewer specified by the SITK_SHOW_COMMAND environment variable.
sitk.Show(grid_image, title="grid using Show function", debugOn=True)
 
# Object oriented interface:
image_viewer = sitk.ImageViewer()
image_viewer.SetTitle("grid using ImageViewer class")
 
# Use the default image viewer.
image_viewer.Execute(grid_image)
 
# Change viewer, and display again.
image_viewer.SetApplication("/Applications/ITK-SNAP.app/Contents/MacOS/ITK-SNAP")
image_viewer.Execute(grid_image)
 
# Change the viewer command, (use ITK-SNAP's -z option to open the image in
# zoomed mode)
image_viewer.SetCommand("/Applications/ITK-SNAP.app/Contents/MacOS/ITK-SNAP -z 2")
image_viewer.Execute(grid_image)
 
sys.exit(0)